Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0447 |
Symbol | cbbT |
ID | 5154919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 446297 |
End bp | 448312 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640555466 |
Product | transketolase |
Protein accession | YP_001236639 |
Protein GI | 148252054 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.127654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCG TTGCGGAGCG CAGAGCAGCC TTAGATGAGG CGCAGATGGC GAACGCGATC CGCGCGCTCG CGATGGACGC GGTCGAGGCT GCGAAGTCGG GCCATCCCGG AATGCCCATG GGCATGGCGG ATGTGGCTAC GGTGCTCTTC AAGCACTTCG TCAAGATCGA CCCGACGCAG CCCAATTGGC CTGATCGCGA TCGCTTTGTG CTGAGCGCTG GGCATGGATC GATGTTGCTG TACGCGCTTC ATCACCTCCT CGGCTTCCAC GACATGCCGA TGGATCAATT GCGCCGTTTT CGTCAGCTCG GTAGTCGCAC TGCCGGGCAT CCGGAATTCG GCCATGCCGC TGGCATCGAA ACGACCACCG GTCCGCTCGG TCAGGGAATC GCAACCGCCG TGGGTATGGC TCTCAGCGAA CGCATGCTGA ATGCGCGTTT CGGCGATGAC CTCGTCGATC ACCACACCTA TGTGATCGCC GGCGACGGCT GCCTGATGGA GGGGATCAGT CACGAGGCGA TTGATCTTGC CGGCCATCTC GGCCTTGGCC GGCTCATCGT GCTGTGGGAC GACAACCAGA TCACGATCGA CGGGCCCACA AGTCTGTCGA CCTCGCTGGA TCAGAAGGCA CGGTTCGTTG CTGCGGGCTG GCATGTCGCG GCCGTCGACG GCCACGACGG TGAAGCGGTC GCCAACGCGA TTATCGAAGC AAGAGCCGAT CCCCGTCCGT CCTTGATTGC CTGCCGCACC ATTATCGGCT TTGGCGCACC CAACAAGCAG GGGACATCGG CCACGCATGG TGCGCCGCTG GGCAAGGAGG AGGTGGCCGC GGCACGCGAG AGCCTCGGCT GGATCTATTC GCCCTTCGAG GTTCCGGAGG CGATCGTCCA TGCCTGGCGC GTAGTTGGCG CTCGCGGAAC GCGCATCCGA GCCGAATGGC AAGAGCGGCT CGCTCGCAGC CCCCAGCGGG AGGAGTTTGT GGCCCATCTC GCGCCCCCCG ATGCCGCGAG GTTGCACGCA GCGTTGGCCG ATCATCGCCG ACGCCTGTGC GGCGAGCGGC CGAAGGTTGC CACTCGCAAG GCTTCCGAGC TGGCGTTGGA GGTCGTGAAT TCAACCATCC CCAACATGGT AGGCGGCTCA GCCGATCTCA CCGGCTCCAA CAACACGCGC ACCAAGGGCA TGCGTCCCGT GACGCGGAGC GATTTCACGG GCAACTACAT CCACTACGGG GTGCGCGAGC ATGGGATGGC CGCGGCGATG AACGGCATCT CGCTGCATGG AGGATTGCGC CCCTATGGCG GCACGTTCCT CGCCTTTTCG GATTATTGCC GCGGGGCGAT CCGCCTTTCT GCTCTCATGG GTCGGCCGGT CATCTACGTG ATGACGCACG ATAGCATCGG CCTGGGGGAG GACGGTCCGA CGCACCAACC GGTCGAGCAC CTCGCATCGC TAAGAGCGAT GCCGAACGTC TACGTGTTCC GGCCCGCCGA CGCGGTGGAG ACGGCGGAAG CCTGGGAGGT CGCGCTTGCC GCAGCCAAGA CGCCGTCGGT GCTTTGCCTC TCGCGGCAGG ATCTGCCGAC GCTGCGCACG GAGCACGGCG ACGAGAACAT GACGGCACGC GGCGCCTATC TCCTGCGCGA TCCTGGCGAG CATAGGGATC TGACCATCAT CGCCACAGGT TCCGAAGTCG CTATTGCGGT CGAGGCCGCC GACGAGTTGT CGGCGGACGG GCTGGCGGTC GCCGTAGTTT CTGCGCCCTG CTGGGAGCTG TTTGCCGCCC AGGAAGCCGG CTATCGCGCT GCTGTTCTGG GCGAGGGACC GCGCGTCGGC GTCGAGGCCG GAGTCGCTCT CGGCTGGGCA GAATGGCTCG GGCCCAATTC CATCTTCATT GGAATGACGG GCTTCGGCGC CTCTGGTCCT GCCGCCGATC TCTACAACCA CTTTGGCATC ACAGCCGAAC GGGTCGCGGC CGAGGGGTGG AGGCTCGCCC GTAAGCCCGG GGAGGAGCAC GAATGA
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Protein sequence | MNLVAERRAA LDEAQMANAI RALAMDAVEA AKSGHPGMPM GMADVATVLF KHFVKIDPTQ PNWPDRDRFV LSAGHGSMLL YALHHLLGFH DMPMDQLRRF RQLGSRTAGH PEFGHAAGIE TTTGPLGQGI ATAVGMALSE RMLNARFGDD LVDHHTYVIA GDGCLMEGIS HEAIDLAGHL GLGRLIVLWD DNQITIDGPT SLSTSLDQKA RFVAAGWHVA AVDGHDGEAV ANAIIEARAD PRPSLIACRT IIGFGAPNKQ GTSATHGAPL GKEEVAAARE SLGWIYSPFE VPEAIVHAWR VVGARGTRIR AEWQERLARS PQREEFVAHL APPDAARLHA ALADHRRRLC GERPKVATRK ASELALEVVN STIPNMVGGS ADLTGSNNTR TKGMRPVTRS DFTGNYIHYG VREHGMAAAM NGISLHGGLR PYGGTFLAFS DYCRGAIRLS ALMGRPVIYV MTHDSIGLGE DGPTHQPVEH LASLRAMPNV YVFRPADAVE TAEAWEVALA AAKTPSVLCL SRQDLPTLRT EHGDENMTAR GAYLLRDPGE HRDLTIIATG SEVAIAVEAA DELSADGLAV AVVSAPCWEL FAAQEAGYRA AVLGEGPRVG VEAGVALGWA EWLGPNSIFI GMTGFGASGP AADLYNHFGI TAERVAAEGW RLARKPGEEH E
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