Gene Avin_43540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_43540 
Symbol 
ID7763227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4399876 
End bp4400658 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID643807209 
ProductABC transporter, ATP binding component 
Protein accessionYP_002801450 
Protein GI226946377 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0288454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTATC CGACGAGCCA GCCGTTGCTC GAGCTGGACA ACATTTCCCT GGCGTTCAAG 
GGCGTCAAGG CGATCTCCAA TATCAGTTTC GCCGTGGCCG ACGGCGAGAT CTGCGCGCTG
ATCGGCCCCA ACGGCGCGGG CAAGAGTTCG CTGCTGAACG TCATCAACGG CGTGTACCGG
CCGCAGGAGG GGCAGATCCG CTTCGACCGG GTCGAGCGGC CGCGGATGCG GCCGCATCAG
GCCGCCGAGC TGGGGATCGC CCGGACCTTC CAGAACATCG CGCTGTTCAG AAGCCTGAGC
GTGCTCGACA ACGTGCTCAC CGGGCGCAAC CTGCGGCGCC AGGGCCACTG GCTCGGCCAG
GCGCTGCGCA CGCCGGGCGC CGCCGCCGAG GAGGATCGCC AGCGCGAGGC GGCGGAGCGG
GTGATCGAGT TCCTGCGCCT GCAGCCGTGG CGCGACGCCG TCGTCGGCCG GCTGCCCTAC
GGTCTGCAGA AGCGCGTCGA GCTGGCCCGC GCGCTGGCCG CCGAGCCGCG CCTGCTGCTG
CTCGACGAGC CGATGGCCGG CATGAACGCC GGGGAGAAGC GCGAGATGAG CCGTTTCATC
GTCGAGACCA ACCGCGAGTT CGGCACCACG GTGGTGTTGA TCGAGCACGA CATCGGCGTG
GTGATGGGGA TTTCCGACCA CGTGGTGGTG CTCGACTACG GCCGCAAGAT CGGCGACGGC
CCGCCGGACG CGGTGCGCCG CGATCCCGAG GTGATCGCCG CCTATCTGGG CACGCGGCAC
TGA
 
Protein sequence
MSYPTSQPLL ELDNISLAFK GVKAISNISF AVADGEICAL IGPNGAGKSS LLNVINGVYR 
PQEGQIRFDR VERPRMRPHQ AAELGIARTF QNIALFRSLS VLDNVLTGRN LRRQGHWLGQ
ALRTPGAAAE EDRQREAAER VIEFLRLQPW RDAVVGRLPY GLQKRVELAR ALAAEPRLLL
LDEPMAGMNA GEKREMSRFI VETNREFGTT VVLIEHDIGV VMGISDHVVV LDYGRKIGDG
PPDAVRRDPE VIAAYLGTRH