Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38220 |
Symbol | pcaI |
ID | 7762713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 3867639 |
End bp | 3868508 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643806687 |
Product | 3-oxoadipate:succinyl-CoA transferase subunit A |
Protein accession | YP_002800939 |
Protein GI | 226945866 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.722574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAA TCCTCACCCT GCGCGAAGCG GTACAGCGCT TCGTCAACGA CGGCGACACC CTCGCCCTCG AAGGTTTCAC CCACCTGATC CCCAGCGCCG CCGCCCACGA AATCATCCGC CAGGGCAGGA AGGACCTGAC CCTGGTGCGC ATGACCCCCG ACCTGGTCTA CGACCTGCTG ATCGGCGCCG GCTGCGCGAA AAAACTGATC TTCTCCTGGG GCGGCAACCC CGGCGTGGGC TCCCTGCATC GTCTGCGCGA CGCGGTGGAG AAGGGCTGGC CGCAACCGCT GGAGATCGAG GAGCACAGCC ATGCCGACCT GGCCAACGCC TACGTGGCCG GCGCTTCCGG CCTGCCGTTC GCGGTATTGC GCGCCTACGC CGGCTCCGAC CTGCCGAAGG TCAACCCGCT GATCAGGAGC GTCACCTGCC CGTTCACCGG CGAGGTGCTG GCCGCGGTGC CCTCGGTGCG CCCGGACGTC ACCGTGATCC ACGCGCAGAA GGCCGACCGC AAGGGCAACG TGCTGATCCA GGGCATCCTC GGCGTACAGA AGGAGGCCGC GCTGGCCGCC AGGCGCTGCA TCGTCACCGT CGAGGAGATC GTCGACGACC TGAAGGCGCC GATGAACGCC TGCGTCCTGC CGACCTGGGC GCTGAGCGCG GTCTGCCCGG TGCCCGGCGG CGCCCACCCG TCCTACGCCC ACGGCTACTA CGAGCGCGAC AACCGCTTCT ACCAGGACTG GGACCCGATC GCCCGCAGCC GCGAGGGCTT CACCGCCTGG ATCGACGCCT TTATCCGTGG CACCGCCGAT TTTTCCGCCT TTCAAGAAAA GATGGGGCAG GCCAGACTGG CCGCCCAGGA GGCCGAATGA
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Protein sequence | MAEILTLREA VQRFVNDGDT LALEGFTHLI PSAAAHEIIR QGRKDLTLVR MTPDLVYDLL IGAGCAKKLI FSWGGNPGVG SLHRLRDAVE KGWPQPLEIE EHSHADLANA YVAGASGLPF AVLRAYAGSD LPKVNPLIRS VTCPFTGEVL AAVPSVRPDV TVIHAQKADR KGNVLIQGIL GVQKEAALAA RRCIVTVEEI VDDLKAPMNA CVLPTWALSA VCPVPGGAHP SYAHGYYERD NRFYQDWDPI ARSREGFTAW IDAFIRGTAD FSAFQEKMGQ ARLAAQEAE
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