| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_16250 |
|---|
| Symbol | eexE |
|---|
| ID | 7760560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 1605579 |
|---|
| End bp | 1606904 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643804525 |
|---|
| Product | Type I secretion membrane fusion protein |
|---|
| Protein accession | YP_002798815 |
|---|
| Protein GI | 226943742 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG CAACCACCAA CCGCCAGCTT CCCGTGCTTG CCGAGCTGCC GACGTCCGAC
CATGGCACGC GCGCGATAGG TTTCCTGATC GTTTTCGTCA CGTTCGGCAT CTTCGGCACC
TGGGCCGCCG TCGCTCCCCT GGACAGCGCG GCCCTGGCCC CGGGGGTCGT GACCGTGCAG
ACCTATCGCA AGACCGTGCA GCACCTCGAG GGGGGCATCG TCAAGGAGCT GCACGCGCGC
GACGGCGATA TGGTCAAGGC CGGCGATCCG CTGATCGTCC TCGACGAAAC CCAGATCCGC
GCCGAGAACG AGGTGACCCG CAGCCAGTTG ATCGCGGCGC AGGCGATGGA GGCCCGGCTG
CGCGCCGAGC GCGACAATCT GGAAACCATC AATTTCTCCT CCATGCTCGA GCTGGACAGC
GCGCGTGCGC GCGAGGCCCG CGACGGCGAA ACCCAGGTGT TCACGGCCCG CCGCAACTCC
CGCCTGGGAG AGGAGGCCGT GCTGGAAAAG CGCATCGGCC AGTTGCACGA GCAGATCAAC
GGCCTGAAAG GCGTGATCCG CACCAAGGGC AGCTTGCAGA ACTCTTTCAC CAAGGAAATC
CGCGAACTGA AGGAGTTGCT GGCCGAGGGG TTCGTCGATA AGCAGCGCCT GCTCGAGCAG
GAACGCAATC TCGACAAGCT GCGCGCCGAG ATCGCCGACC ACAGCTCGGA AATCACCAAG
ATCCGCTTGC AGATCAATGA AACCGAGCTG CAGATTCTCC AGCTCAACAA GGACTTCAAC
GCCGATGTCG TCAGCCAGTT GGCCGAGGTG CAGACCAAGG TCTTCGATCT GCAGGAGAAG
AAGTCCGCCC TGGAGGACCG CCTGAGCCGC GTGGTGATCC GCGCGCCCGA GGACGGCATG
ATCCTGGGTA TGACGGTGCA TACCATCGGT GGCGTGATCA ATCCGGGAAC GCCTCTGCTG
GACATAGTGC CGTCCATCTC CGATCTGGTC ATCGAGGCCC AGGTCGCGCC CAGCGATATC
GACCGGGTCG AGGCCGGCAA GTCCGCCGAT ATCCGCTTCA GTGGCTTCAA CAGCCGCACG
ACCCCGGTCG TCGAGGGCAA GGTGCTGCGG GTTTCCGCCG ACCGCCTGGT CGACGAGAAG
AACGGCATGC CCTATTACCT GGCCCGTATC GGCCTGACCG AGGAGGGAGC CCGGCGCCTG
GGCGAGCTCA GGCTGCAACC GGGCATGCCG GCGGAGGTTT ACATCAACAC TGGCAAGCGC
ACCATGCTGC AATACCTGCT ACAGCCGGCC ACCGATGCGT TCGCCAGATC GCTGATTGAG
GAGTGA
|
|---|
| Protein sequence | MTDATTNRQL PVLAELPTSD HGTRAIGFLI VFVTFGIFGT WAAVAPLDSA ALAPGVVTVQ
TYRKTVQHLE GGIVKELHAR DGDMVKAGDP LIVLDETQIR AENEVTRSQL IAAQAMEARL
RAERDNLETI NFSSMLELDS ARAREARDGE TQVFTARRNS RLGEEAVLEK RIGQLHEQIN
GLKGVIRTKG SLQNSFTKEI RELKELLAEG FVDKQRLLEQ ERNLDKLRAE IADHSSEITK
IRLQINETEL QILQLNKDFN ADVVSQLAEV QTKVFDLQEK KSALEDRLSR VVIRAPEDGM
ILGMTVHTIG GVINPGTPLL DIVPSISDLV IEAQVAPSDI DRVEAGKSAD IRFSGFNSRT
TPVVEGKVLR VSADRLVDEK NGMPYYLARI GLTEEGARRL GELRLQPGMP AEVYINTGKR
TMLQYLLQPA TDAFARSLIE E
|
|---|
| |