7 homologs were found in PanDaTox collection
for query gene Avin_11860 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_11860  hypothetical protein  100 
 
 
161 aa  323  5e-88  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2879  putative transmembrane protein  50.32 
 
 
170 aa  131  5e-30  Polaromonas sp. JS666  Bacteria  normal  0.753828  normal  0.386042 
 
 
-
 
NC_012791  Vapar_2836  putative transmembrane protein  40.45 
 
 
179 aa  115  1.9999999999999998e-25  Variovorax paradoxus S110  Bacteria  normal  0.223898  n/a   
 
 
-
 
NC_007974  Rmet_5688  hypothetical protein  34.69 
 
 
181 aa  70.5  0.000000000009  Cupriavidus metallidurans CH34  Bacteria  normal  0.960278  normal 
 
 
-
 
NC_007347  Reut_A0403  transmembrane protein  37.76 
 
 
181 aa  66.6  0.0000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2676  hypothetical protein  29.51 
 
 
178 aa  65.1  0.0000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.265774 
 
 
-
 
NC_010682  Rpic_2912  putative transmembrane protein  36.36 
 
 
189 aa  64.3  0.0000000006  Ralstonia pickettii 12J  Bacteria  normal  0.398415  normal 
 
 
-
 
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