Gene Vapar_2836 details

Gene Information

• Locus tag: Vapar_2836
• ID: 7970725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 2982615
• End bp: 2983154
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644793421
• Product: putative transmembrane protein
• Protein accession: YP_002944722
• Protein GI: 239815812

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.223898
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCCGGC GACAGGACGG CGCGGCGCTG ATCGTCGGGC TGATCATGCT GGTGCTCATC 
ACGCTGGCCG TGACGGCGGG GTTCACGCTC AGCAACACCA ACCTCAAGTC GGTCGGCAAC 
ATGCAGAGCC GGAACGAAGC CGTGGCCGCT TCCAACCGCG CCATCGAGGA AGTGGCGGCC 
TCGCTGCTGC TGCCGGGCGT GGACGGCTCG CCTTCGCTTG CGGCGCCGCA GCGCACCGTG 
AGCATGGTGG ACATCAACAA CGACGGCACG ATCGATTACG AAGTCCAGAT TGCACCGCCG 
ACCTGCGTGC GGGCGACCAA GTCGACGGAT ACCGGCGGCG GCGGCGCGGT GGGACCCGGC 
GGCATCGGCG GCGGGGCATC CACCGCCGGC TCGGGCCTCA ATGCGCTGCC CGACCAATAC 
AACTCGGTGT GGGACATCAG CACCAGCGTG ACCGATGCCG TGAGCGGCAC GGTCACCTCG 
GTTCGCCAGG GCGTGCGCGC GCTCCTGAGC AAAGAGCAGT TCCTGGCGCT GTGTTCATAG 

 

Protein sequence

MRRRQDGAAL IVGLIMLVLI TLAVTAGFTL SNTNLKSVGN MQSRNEAVAA SNRAIEEVAA 
SLLLPGVDGS PSLAAPQRTV SMVDINNDGT IDYEVQIAPP TCVRATKSTD TGGGGAVGPG 
GIGGGASTAG SGLNALPDQY NSVWDISTSV TDAVSGTVTS VRQGVRALLS KEQFLALCS