| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_10020 |
|---|
| Symbol | |
|---|
| ID | 7759947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 953160 |
|---|
| End bp | 954392 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643803907 |
|---|
| Product | HI0933-like protein |
|---|
| Protein accession | YP_002798209 |
|---|
| Protein GI | 226943136 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.148718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG TCACTTCCAC CCCCATGGTC GCCATCATCG GCGGCGGACC GGCCGGCCTG
ATGGCCGCCG AGGTGCTGAG CCGGGCGGGC CTTGCCGTCG AGCTGTACGA ACGCATGCCC
TCGGTCGGGC GCAAGTTCCT GCTCGCCGGG ATCGGCGGGA TGAACATCAC CCACGCGGAG
GCGCACGAAG CCTTCCTGTC CCGCTACGGC ACGCGACGCG CGGAAATCGG ACGGCTGCTG
GAGGAGTTCG ACGCCCAGGC GTTGCGCCAG TGGGTGCACA GCCTGGGCAT CGACACCTTC
GTCGGCAGCT CCGGGCGGGT ATTCCCCGCC GACATGAAGG CCGCGCCGCT GCTGCGCGCC
TGGCTGCGGC GCCTGCGCGA GGCCGGCGTG CAGATCCACA CCCGCCACCG CTGGCTCGGC
TGGGACGCCG ATGGCGCCCT ATGCCTGGCC ACTGCGGCGG GCGAGCGGCG CATCCGGCCC
GCCGCCACCC TGCTCGCCCT GGGCGGCGGC AGTTGGGCGC GGCTCGGCTC GGACGGCGCC
TGGGTAGCGC TGCTGGAGGC GCGCGGCATA GCGGTCACGC CCCTGCGCCC GGCCAACTGC
GGCTTCGATG TGGCCGGCTG GAGCGCGCAC CTGCGCGAAC GCTTCGCCGG CGCGCCGTTG
AAGAACGTCG CCCTGGGCCT GGACGACGGG CCGGCGCGGC AAGGGGAGTT CGTGCTGACC
GCCGGGGGAA TCGAAGGCAG CCTGGTTTAT GCGCTGTCCG CGACGATCCG CGACAGGATC
GAGCGCGAAG GCGGCGCCAC CGTTTTCATC GACCTGCTGC CGCGGCACGC GCCGGCCAGG
GTGCTCGCCG CCCTGCGCAA ACCACGCGGC TCGCGCTCCA TGGCCAGGCA CCTGCACGGC
CAGCTCGGCC TCGACGGGAT CAAGGCCGCG CTGCTGCGCG AACTGGCGCC GGCCGCCGCC
TTCGTCGAGC CGGAGCGGTT GGCCGGGCTG ATCAAGGCAT TGCCGCTCGA ACTGGTGCGC
CCGCGCCCGC TGGACGAGGC GATCAGCAGC GCCGGCGGCG TGCCTTTCGA GGCACTGGAC
GAAAACCTGA TGCTGCGCGA GGCGCCGGGA ACCTTCTGCG CCGGCGAGAT GCTCGACTGG
GAGGCGCCGA CCGGCGGCTA CCTGCTCACC GCCTGCTTCG CCGGCGGCCG GGCCGCGGCC
CACGGGCTGC TGCGCTGGCT GGGATACCGA TAG
|
|---|
| Protein sequence | MSDVTSTPMV AIIGGGPAGL MAAEVLSRAG LAVELYERMP SVGRKFLLAG IGGMNITHAE
AHEAFLSRYG TRRAEIGRLL EEFDAQALRQ WVHSLGIDTF VGSSGRVFPA DMKAAPLLRA
WLRRLREAGV QIHTRHRWLG WDADGALCLA TAAGERRIRP AATLLALGGG SWARLGSDGA
WVALLEARGI AVTPLRPANC GFDVAGWSAH LRERFAGAPL KNVALGLDDG PARQGEFVLT
AGGIEGSLVY ALSATIRDRI EREGGATVFI DLLPRHAPAR VLAALRKPRG SRSMARHLHG
QLGLDGIKAA LLRELAPAAA FVEPERLAGL IKALPLELVR PRPLDEAISS AGGVPFEALD
ENLMLREAPG TFCAGEMLDW EAPTGGYLLT ACFAGGRAAA HGLLRWLGYR
|
|---|
| |