Gene Avin_00480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_00480 
Symbol 
ID7759015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp47832 
End bp48815 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content69% 
IMG OID643802974 
ProductABC transporter, ATP binding component 
Protein accessionYP_002797290 
Protein GI226942217 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.446207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCCT TGCTGGACGA TCCTTCTCTC GGCGAGTTCT TCCGCCTCAA CGGTCTGCCG 
CAACCGCAGC CCCACGTCCG GCTGGACGAC TACTGGCAGG GCCTGGCCTG GCAGCAGCGG
GATCTGGGGG GCTGGACCCT CGACAGCCTG GCCGATGCGC TGGTCAGTTT CATGGCGGCC
CGGAACGATC CGGCCGGCTC CCCGGTACGG CTTTGCAGCC TGCAGATCCT GGCGGGGCAG
GCCAAGGACG GGACACCGGA AACCCAGGAC CTGAATTTCC TGCCGGGCGA TGTCGTCTGC
ATCGTCGGTC CCACGGGCTC CGGCAAGAGC CGCTTGCTGG CGGACATCGA GTGCCTGGCC
CAGGGCGACA CGCCATCGCG CCGGCGGGTG CTGGTCAACG GGCTGGAGCC CGATCCGGAG
TGGCGTTTCT CCAGCGAGGC CCGGCTGGTG GCGCAGATCA CCCAGAACAT GAACTTCGTG
ATGGATCTGT GCGTGGGCGA TTTCCTCTGT CTGCACGCCG AGAGCCGCCG GCTCGACGAT
CCCCGGGCCG CCGCCGACCG GGTGCTGGCG GCGGCGGTGG ACATGGCCGG CGAACCTTTC
GCCGCCGGCA CCCCGCTGAC CCAGTTGTCC GGCGGCCAGT CGCGGGCGCT GATGATCGCC
GATGCCGCCC TGCTCAGCCC CAAGCCGATC GTGCTGATCG ACGAGATCGA GAACGCCGGG
GTGGACCGCA ACCGGGCGCT GAGACTGTTC GTCGAAAAAG GCAAGATCGT CCTGCTGTCC
ACCCACGATC CCCTGTTGGC GCTCTCCGGC AGTCGGCGCC TGGTGATCCG CAACGGCGCC
ATCGCCAAGG TCGTCGAGGC TTCGCCCGAG GACCGCCGCT ACGCCGAAGA ACTGGCACGC
CTGGATCGCG GCATGGCCAC CCTGCGCGAG GCGATCCGTC GGGGACAGGC GCCGGCCGAG
GTGTGGCCCG GGTTGGGATT CTGA
 
Protein sequence
MNPLLDDPSL GEFFRLNGLP QPQPHVRLDD YWQGLAWQQR DLGGWTLDSL ADALVSFMAA 
RNDPAGSPVR LCSLQILAGQ AKDGTPETQD LNFLPGDVVC IVGPTGSGKS RLLADIECLA
QGDTPSRRRV LVNGLEPDPE WRFSSEARLV AQITQNMNFV MDLCVGDFLC LHAESRRLDD
PRAAADRVLA AAVDMAGEPF AAGTPLTQLS GGQSRALMIA DAALLSPKPI VLIDEIENAG
VDRNRALRLF VEKGKIVLLS THDPLLALSG SRRLVIRNGA IAKVVEASPE DRRYAEELAR
LDRGMATLRE AIRRGQAPAE VWPGLGF