Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9801 |
Symbol | repB |
ID | 7379946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011986 |
Strand | + |
Start bp | 1481 |
End bp | 2518 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643648235 |
Product | replication protein B |
Protein accession | YP_002546472 |
Protein GI | 222102331 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins [TIGR03454] plasmid partitioning protein RepB |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCGTA AGAATTTGCT GTCAGGGCTT CTTGATGATG CGGATAAAAA CCCGCCTTCT TTACCAATCT CTGACGCCAC TCCCACGACC TTACGTCCGA CAACAAGAGG TCTCGGCGCA CTTGGCGCAG TGACGCGAAG CATCGATGAG CTCGCGGCAC GGGCGGACGC TGCCCGAGAT TTGGAAGAGA GACTAGCTGC AGGCGAAACG ATTGTTGATT TGGACGTCGA TTTAATCGAC AGTTCATTTA TCAGCGACCG TGTTGGCATG GATGAAGTGG GCTTCAGAGA GCTCGTTGAG GCAATTAGTG TTCGTGGTCA GGATTCTCCA ATCCTGGTGC GTCCACATCC CGACAGAACT GGGCGGTTCC AGACCGTATT TGGCCACCGT CGCGTACGTG CCGCCAAAGA ATTGGGAATT TCTGTCCGGG CAGTCGTCAA GAAGCTCGAA GATAGAGACC ACGTGATAGC TCAAGGACAG GAAAATTCGC AGCGAGCGGA CCTGTCCTTT ATAGAGCGCG CCCTGTTCGC CCGTAATCTC GAACTAGGTA ATTTCGGCCG CGACACGATC ATGCTAGCTC TCGGTGCGGA TAAAACGACC GTGTCCAAGA TGCTTTCGGC GATCGAAAGA TTTCCTGAGG ATATCCTGGC AACGGTAACA CAGGCGAGGG CGCCAGGCCG CGACCGCTGG TATGGAATCG GCGCTGCATT GGGGAACCCT GCGATTGCGG CAAAGGCTCG AAACCTACTC ACCCATGACG ATTACGTCGC AGCTTCGCCG GAGAGCCGGT TTGAAATGCT CGAACGTTTG ATTCCGAAAG AGATGAAAGT CTCAAAGAAA GGTTCAACGG ACCAAAAATG GGTTAGTCCG AAGAACTTGA TAAAAGCAAC CATCAAGAAC AATGGCTCGG GTGTGACGAT TGCGCTTAAG CCATTCAAGA ATTCTGGTAA GGCGGCTGCT TTTGGCACTT ACCTGACCGA AAACCTTGAT CGCCTGTTCG CAGCGTTCGA GGATGATCAA CCGGAAAGTG GAGACTGA
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Protein sequence | MARKNLLSGL LDDADKNPPS LPISDATPTT LRPTTRGLGA LGAVTRSIDE LAARADAARD LEERLAAGET IVDLDVDLID SSFISDRVGM DEVGFRELVE AISVRGQDSP ILVRPHPDRT GRFQTVFGHR RVRAAKELGI SVRAVVKKLE DRDHVIAQGQ ENSQRADLSF IERALFARNL ELGNFGRDTI MLALGADKTT VSKMLSAIER FPEDILATVT QARAPGRDRW YGIGAALGNP AIAAKARNLL THDDYVAASP ESRFEMLERL IPKEMKVSKK GSTDQKWVSP KNLIKATIKN NGSGVTIALK PFKNSGKAAA FGTYLTENLD RLFAAFEDDQ PESGD
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