Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_9608 |
Symbol | |
ID | 7381948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011991 |
Strand | - |
Start bp | 76409 |
End bp | 77671 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643653283 |
Product | isopropylmalate/homocitrate/citramalate synthase |
Protein accession | YP_002551454 |
Protein GI | 222109189 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.793955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGATT TAATCCTGGA GACAGCGCTT AGCAATAGGG TTATCTTTCA TGAAGAGGTG GCGAGGGACG GGGCGCAAGG GAAGACGCTC CTGAATGGCC ATCAGAGAGT TCAAATCGCA AAACGTCACA GCTCCATTTT CGGTGAATTC GCGCCTTATC ACTTGGTCTT CAATGCTGGT TTCCCGAGTG CTGGCAAGGA TGAGCTTGAA GCGACAAGGC AGGTCGTTGA TTGCGTCGAC GAATGCTATG TCGGAGCAGC TGGACGAGCA ACTCGGCAAG ATGTTGATTT GTTGCTCCAG GCGGTACACG GCGCGCGGCA CGGTAGGATC TTCATTGCTG TGCCTGCCTC CAATCCTATG GCATATTCCA TGATGCATTG TACGGCTGAG AAGGCAAAAC AAGCGGCATT GGATATGGTA AGATATGCCA GAGATAAGAA CCCAGCCTTG ATGGTTGACG TGGCCCTTGC AGATGCATCT CGTTCCGACG TGGGCTTTCT AGCCGCGTCG GCGGCCGAGT ACGCCGCCGC CGGTGCATCA ATGGTGATCG TATGTGACAC GGTGGGGCAG TTTTTTCCGT CGGAAAGCCG ATGGTTTTTT GACGAACTTG CTCGACGGTC TGATCCGGAT TTGCGTTACG TTGCTCACAT GCACAACGAT CTTGGCTTCG GCTTAGTCAA TACACTTGAA GCTTTGTCTG CCAAAATATA TGGCCTGACG AGTTCATGGC TCTCTCTTGG AGAGCGGGCA GGAATGCCTG CAACAGAACA GTTACTGTTT GCGCTTGGCT ATCAAAGCAG TCTTTTGCCA AAAAAGTTGG GCGTCGTGGA TGAGATATGG CGCTCACCAC CTGATCTACG TCAGCTCTCG CCGATCGCAA GGTACGTCAG TCAAAGTACA CGAAGGCCTC TCATGACAAC CGATCCCATT GTGGGAACAG GTGTGAACAC GATTTCGACC GGCACGCCAT TCACGAATCC GGCTCTCTTT CAGCCGTTCG ACCCCTTAGA GATACTTGGA GTTGAACCAA AGGTGCTGTT GAGCTCTCTA GCAAGCCACC GCATAATTCA TGCCGTTGCG GCTCGGCTAG GATGGGCGCT CGACCAGTCT CAGGCATCCG CAGCTCTTGA ATGGGTAAAG GCCGAGGCCT TCAGCCGCAA TGTAGCTATT ATTGAAGATG AAGACTTTGA GCATTTTTTA AAGGGAGCGA ACTTCGCCCA AACATCCGCC GCCGCGAAGG ATCACCTTAG GATCTCTCGA TGA
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Protein sequence | MSDLILETAL SNRVIFHEEV ARDGAQGKTL LNGHQRVQIA KRHSSIFGEF APYHLVFNAG FPSAGKDELE ATRQVVDCVD ECYVGAAGRA TRQDVDLLLQ AVHGARHGRI FIAVPASNPM AYSMMHCTAE KAKQAALDMV RYARDKNPAL MVDVALADAS RSDVGFLAAS AAEYAAAGAS MVIVCDTVGQ FFPSESRWFF DELARRSDPD LRYVAHMHND LGFGLVNTLE ALSAKIYGLT SSWLSLGERA GMPATEQLLF ALGYQSSLLP KKLGVVDEIW RSPPDLRQLS PIARYVSQST RRPLMTTDPI VGTGVNTIST GTPFTNPALF QPFDPLEILG VEPKVLLSSL ASHRIIHAVA ARLGWALDQS QASAALEWVK AEAFSRNVAI IEDEDFEHFL KGANFAQTSA AAKDHLRISR
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