Gene Avi_9244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_9244 
Symbol 
ID7367847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011984 
Strand- 
Start bp192798 
End bp193478 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content57% 
IMG OID643644410 
Producttranscriptional regulator GntR family 
Protein accessionYP_002542707 
Protein GI222083304 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.173978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGTG AGATGATATT CAAAGCAAGC GAGCGAACGA AATCTGCGCC GGAGGTTGTC 
CGCGACGGAC TTCGTGAGTC GATAGTGTCC GGCCAATACG ATCCGGGCCA GCAGCTCCGT 
CAGGACGAGT TGGCGGAGCA GTACGGGACA AGCCGCATTC CGGTCAGAGA AGCACTCAGG 
CAGCTCGAGA CGGAAGGACT GGTGACAATC AGTCCCAACA AGGGTGCTGT CGTTAAGGGT 
TTTTCTCTCG ATGACATCGT CGAGATGTTC GATATCCGGA TCGCCTTGGA GTGCCGTGCG 
CTCAAGCTCG CCGTCCCGAA CTTCGCGATT GAGGATGTTG AGATGGCCCG CCAGATCCTT 
GAGGAGTACG ACGCGAGTCC AGAACCCACG AACTGGGGAG AAATGAACTG GCGGTTCCAC 
TGGACACTCT ATGCTCCGTG CGACCGTCCA AGATTGCTGT CGATGATCGA AGCCAACTAC 
GGCCATGTGA ACCGCTTCAT CCGGACGCAG GTTTCGATGG CCTCTGGAAA AGCACGTCCC 
CAAAAGGAGC ATCTCGAGAT TCTCGACCTC TGCCAGAAGG GCGACGTAGC CTCAGCTGCC 
GCGCTATTGG AGAGCCACAT CGAGCAGACC CAGCGGTCAC TTCAAGCGGC GCATCGCCAA 
TACGGTCGGC TGAAGAAATG A
 
Protein sequence
MSGEMIFKAS ERTKSAPEVV RDGLRESIVS GQYDPGQQLR QDELAEQYGT SRIPVREALR 
QLETEGLVTI SPNKGAVVKG FSLDDIVEMF DIRIALECRA LKLAVPNFAI EDVEMARQIL 
EEYDASPEPT NWGEMNWRFH WTLYAPCDRP RLLSMIEANY GHVNRFIRTQ VSMASGKARP 
QKEHLEILDL CQKGDVASAA ALLESHIEQT QRSLQAAHRQ YGRLKK