| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9125 |
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| Symbol | |
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| ID | 7367679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | - |
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| Start bp | 89674 |
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| End bp | 91161 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643644326 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
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| Protein accession | YP_002542623 |
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| Protein GI | 222083220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.239655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGC TTTCGGCGAC GAATCTGCGC AAGAATTATG GTCCGACAAG AGCGCTTGCC
GGCTTGTCCA TGGAACTGTC CTCGGGCGAC ATCGTCGGGC TGGCTGGTCC AAATGGGGCT
GGAAAGAGCA CCCTCACCCG CATGCTCGCG GGCGAAGAAC TCCCGGACTC CGGCTCGATC
ATCTTGGAAA GGGACGGTCG TGGCGTCGAC CGCGTAACGG ATCACGTTGC GGTCGTCCAT
CAGGAACCCC AGGTCTGGCC AAACCTGACC GTGCTTGAAA ACCTTGCGGT CGGCCGCGAA
GCCTCCGCCG TGGGTTCGCC GCGACCCAAG GTAGATCCAT CGCCGGCGCT GAAACTGCTG
GAACTGGAGC GTTTCGCGCA CTACCAGCTC TCCGATCTGT CACTCGCCGT TCAGCAACGC
GTTGAGATTG CGCGGGCAAT CATGTACGAA GCGGACATCT TCCTGTTCGA CGAGCCGAAT
TCCGCGCTAA CCGACGAGGA GTCGAAATCG CTCTTCTCGG TCATGCGGCG ATTGGCCGAT
GCGGGCAAGA TCGTCCTCCT GATCACGCAT AGGCTCGAGG ATTTCGTCAA TTCCTGCGGC
CGGGTTCTGG TTCTGCGAGA CGGCACCATT CAAGGCGACC TCTCGGGCGA TCGCATGACC
GAGATGGCAA TCGTCAGGGA GCTCACCCAT GGCCTTAGCC TGACGGAGGC GACTTCACGC
GCGACGGGCC GTCAAATGCC ACCGGACCCG TCGTTCATCG TCTCGCTCAA TAGCTGCTCC
GATCCAGCCG GAAGTTTTGA CCGGATCGAT CTGAATATTG TGCCCGGAAC CGTTACCATC
GTCGCTGGAG TTGAGGGCTC CGGAGCGCGC GAACTTGTTC GCGCTCTGGG CCGCTATAGT
CCGATCAGCG GAAATCTGAA CGCCAGGCGG AAAGACGGCA ATGAAATCGC CGTTAGTTAT
GTTGCTGCAA GCAGGCGATC GACCGTCTTC CCGAACTTAA GCGTTGGCGA CAATCTCGTT
GCCCGGCTCA ATTGGTCGTC ACTATGCAGC CCGATACCCT TTCTTTCCCG CTCGAAGATT
GCTGCCCGGG CTGACGCTGC GGTCAAGAAA TACTTTGTAA AGACCGCGAG CATCGACCAT
CCGATCACCT CGCTCAGTGG TGGAAACCAG CAGAAGGTGG TCGTCAGTGC GGCAGTTGAA
TATGGTGCGG AACTTCTGGT CATCGAGGAG CCGACCCGCG GGGTGGACTT TAGCAGTAAA
CGGGACATCT ATGCGATCCT TCGTGACTAT GCTGCGAAAG GTAACGCTGT TGTTCTTTTC
TGCACAGAAG TCCCGGAAAT GTATGAGGTT GGCGACGAGG TGGTCGTTGT ATCGCATGGC
CGCATCATGG GCAATGCGGC CATCGACGAA CATGCCTCGG CGACCCAGTT GACACATCGC
ATCACCGAAC TGGAATCCGG CCATTCCACC ATCTCGGAAA GGGCTTGA
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| Protein sequence | MIRLSATNLR KNYGPTRALA GLSMELSSGD IVGLAGPNGA GKSTLTRMLA GEELPDSGSI
ILERDGRGVD RVTDHVAVVH QEPQVWPNLT VLENLAVGRE ASAVGSPRPK VDPSPALKLL
ELERFAHYQL SDLSLAVQQR VEIARAIMYE ADIFLFDEPN SALTDEESKS LFSVMRRLAD
AGKIVLLITH RLEDFVNSCG RVLVLRDGTI QGDLSGDRMT EMAIVRELTH GLSLTEATSR
ATGRQMPPDP SFIVSLNSCS DPAGSFDRID LNIVPGTVTI VAGVEGSGAR ELVRALGRYS
PISGNLNARR KDGNEIAVSY VAASRRSTVF PNLSVGDNLV ARLNWSSLCS PIPFLSRSKI
AARADAAVKK YFVKTASIDH PITSLSGGNQ QKVVVSAAVE YGAELLVIEE PTRGVDFSSK
RDIYAILRDY AAKGNAVVLF CTEVPEMYEV GDEVVVVSHG RIMGNAAIDE HASATQLTHR
ITELESGHST ISERA
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