| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_8165 |
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| Symbol | |
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| ID | 7365073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011982 |
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| Strand | - |
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| Start bp | 113659 |
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| End bp | 115041 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641775 |
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| Product | oxidoreductase |
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| Protein accession | YP_002540072 |
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| Protein GI | 222080209 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0557691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGACCA TGCGCGTGCG AAGGGCTGAT CCGATGGACG CTCTATCACG CGATATCCCG
TTCAAACTCG TTCGGGTGAA CAGCAACGAC AAGCTGCCCG AGCAAGCCGA TGTCGTCGTC
ATCGGCGGCG GCATCGCCGG CATTTCGGCC GCCTACTATC TTGCCAAGAA AGGTCACAGC
GTCGCCGTCA TCGAAAAGGG TGCCGTTGCG GCCGAGCAAT CCAGCAGAAA CTGGGGCTGG
GTGCGGCAGC AGAATCGCGA CGAGCGCGAG CTTCCTTTGG CGAAGTGGTC GCTCGCAGCA
TGGCAGGAAC TATCCGACGA AATCGGTCCG GATCTAAGCT TTGTCCGCAG GGGCCTGATG
TATGTTACGA GCAGCGAGAA AGAGCTCGCC GGTTGGGAAA AATGGGTGAA GATGGCGGGC
GGCTATGGCG TTCAAAGCCG CATGGTGTCC AGTGCCGAAA TCAAGGCTGC CGCTACCGGC
TCCACCACGC AATGGATCGG CGGCGTTCAT TCTCCGACCG ATGGGTTCGC GGAACCGACA
ATGGCGTGCT CGGCTATTGC CAAGGCGGCT CAGAGGCATG GGGCGACGAT CCACCAGAAC
TGCGCCGCCA GAGGCATCGA AACACAGGCC GGCAAAATAC ACAGCGTCGT CACCGAGAAC
GGAAGCATCC GCACGTCACG CGTACTATGC GCCGCGGGCG CCTGGACCTC GATGTTCTTC
CGTTGGCATG GGATCAGTTT CCCGCAGGTT GGTGTAAGGG CAACAGCTTT CGCGACCAAG
CCAGGCGCGA AGGTGATCGA GGGTGGTTTC TCCACCCCAT CGTTCACCTT CAGACCGCGC
GCAGAGGGCG GCTATACCGT TTCCATCCGC GGACGGGCAA AGGTCGAATT GACACCTCAG
GCCTTCCGGT ATGCGCAGCA GTTCATGCCA ATGTTCAAGG CGCGCTGGTC GACGAGCCTG
TCGCTCGGGA TCAGCCGCTT CGCGGTAACC GGGCCCGAGG CTCTGGCCCG GTGGACTTTG
AGTAGCGTTT CGCCTTTCGA GAAAATGCGG GTGCTCAACC CAGCACCGGA CGCGAAGACG
GTAGAACTCG CCATGAAGGC TTTGATGGAA AGTTTTCCGG AGCTTTCCGG AATCGGTGTG
TCCCACGCCT GGGGAAGCTG GATCGACTCG ACGCCGGATG CGGTCGCTAC AATCGGTCCA
GTTCCTCAAT TGCCCGGCCT TTACGTGGCG TCCGGGTTTA GCGGGCATGG ATTTGGCGTC
GGACCGGGCG CAGGTCGGCT CGCAGCCGAT CAGATCATCA ACGACGACCC GATCGTTGAT
CCCACCCCGT TGCGGTTCAC CCGCTTCTCC GAGCATGACG TGGGCGCTCC GGCGGCCATG
TAA
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| Protein sequence | MPTMRVRRAD PMDALSRDIP FKLVRVNSND KLPEQADVVV IGGGIAGISA AYYLAKKGHS
VAVIEKGAVA AEQSSRNWGW VRQQNRDERE LPLAKWSLAA WQELSDEIGP DLSFVRRGLM
YVTSSEKELA GWEKWVKMAG GYGVQSRMVS SAEIKAAATG STTQWIGGVH SPTDGFAEPT
MACSAIAKAA QRHGATIHQN CAARGIETQA GKIHSVVTEN GSIRTSRVLC AAGAWTSMFF
RWHGISFPQV GVRATAFATK PGAKVIEGGF STPSFTFRPR AEGGYTVSIR GRAKVELTPQ
AFRYAQQFMP MFKARWSTSL SLGISRFAVT GPEALARWTL SSVSPFEKMR VLNPAPDAKT
VELAMKALME SFPELSGIGV SHAWGSWIDS TPDAVATIGP VPQLPGLYVA SGFSGHGFGV
GPGAGRLAAD QIINDDPIVD PTPLRFTRFS EHDVGAPAAM
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