| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7228 |
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| Symbol | |
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| ID | 7380381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | + |
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| Start bp | 193369 |
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| End bp | 194169 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643641328 |
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| Product | outer membrane lipoprotein |
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| Protein accession | YP_002539625 |
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| Protein GI | 222102586 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGTCGCGCA GAGCGGGTCT GGCAGCTTTG ATGGCGCTGG CAGTGGCCGC TGGCACCGGT
GCATTGCGGG CTCACGCCGA GGATAAGGTG ATCAAGGTCG GCATCGTCAG CGGCGAAGAT
GAAGATGTCT GGCGCGCAGT GGCGCAGGAA GCCGCCAAGA AGGGCCTGAC AATCAAGACC
GTGGTGTTTA ACGATTACAC CCAGCCGAAT GAGGCCCTCG AGCGCGGTGA AATCGACGCC
AATGCCTTCC AGCACAAGCC TTATCTGGAT AACCAGATCA AGCAGCACGG CTACCACATC
ACGCCGGTTG GCTATACGGG CGTCTGGCCC ATCGGCCTCT ACACCAAGAA ATACAAGGCG
GTTGCGGACC TTCCCAAGGG TGCGCAGATC GGCGTCCCCA ACGACCCTTC CAACGAAGGC
CGTGCGCTGC GCGTGCTTCA AAATCAGGGC TTGATCAAGC TGAAGGATGG CACGGGCATT
TTGGCAACCA TTGCCGATAT CACTGAAAAT CCGAAATCCA TCAAGATCAA GGAATTGGAT
GCGGGCATTG TTGGCCGCGC CATTGATGAC CTTGATGCCG CCGTCGTCAA TACCGACTGG
GCGCTGAAGG CAGGTCTTTC ACCCGCCGAC CGCATTGCGC AGGAGCCAAC GGCTGACAAC
CCGTACCGTA ACTTCATTGC AGTCAAACAG GGCAAGGAAA ATGAGGCGTG GGTCAAGACG
CTGGTGGCCT CTTACCAGAA CGATACGGTC AAGGCCGTGT TTGACAAGGT CTACAAAGGC
ACCGGCATCG TTGCCTATTG A
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| Protein sequence | MSRRAGLAAL MALAVAAGTG ALRAHAEDKV IKVGIVSGED EDVWRAVAQE AAKKGLTIKT
VVFNDYTQPN EALERGEIDA NAFQHKPYLD NQIKQHGYHI TPVGYTGVWP IGLYTKKYKA
VADLPKGAQI GVPNDPSNEG RALRVLQNQG LIKLKDGTGI LATIADITEN PKSIKIKELD
AGIVGRAIDD LDAAVVNTDW ALKAGLSPAD RIAQEPTADN PYRNFIAVKQ GKENEAWVKT
LVASYQNDTV KAVFDKVYKG TGIVAY
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