11 homologs were found in PanDaTox collection
for query gene Avi_6016 on replicon NC_011988
Organism: Agrobacterium vitis S4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011988  Avi_6016  hypothetical protein  100 
 
 		 383 aa  776    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011365  Gdia_0782  GumK protein  33.43 
 
 		 368 aa  177  3e-43  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.333627  normal  0.879319 
 
 
-
 
NC_010513  Xfasm12_1530  GumK protein  30.69 
 
 		 394 aa  162  7e-39  Xylella fastidiosa M12  Bacteria  normal  0.182553  n/a   
 
 
-
 
NC_010577  XfasM23_1474  xanthan biosynthesis glucuronosyltransferase GumK  30.69 
 
 		 394 aa  162  1e-38  Xylella fastidiosa M23  Bacteria  normal  0.0194477  n/a   
 
 
-
 
NC_010717  PXO_01401  exopolysaccharide xanthan biosynthesis glucuronosyltransferase GumK  29.35 
 
 		 398 aa  151  2e-35  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.944331  n/a   
 
 
-
 
NC_008752  Aave_0962  hypothetical protein  24.78 
 
 		 378 aa  64.3  0.000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011313  VSAL_II0299  putative glycosyl transferases  23.96 
 
 		 385 aa  49.7  0.00008  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_2340  glycosyl transferase, group 1  25.9 
 
 		 397 aa  49.3  0.0001  Pseudomonas mendocina ymp  Bacteria  normal  0.107482  normal  0.0271805 
 
 
-
 
NC_013730  Slin_0280  glycosyl transferase group 1  25.5 
 
 		 403 aa  46.6  0.0008  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1195  hypothetical protein  23.9 
 
 		 420 aa  44.3  0.003  Methylobacillus flagellatus KT  Bacteria  normal  0.291365  normal  0.75436 
 
 
-
 
NC_008578  Acel_1929  glycosyl transferase, group 1  27.03 
 
 		 409 aa  43.9  0.004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>