Gene Avi_5902 details

Gene Information

• Locus tag: Avi_5902
• ID: 7380997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011988
• Strand: +
• Start bp: 913864
• End bp: 914589
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 643649419
• Product: hypothetical protein
• Protein accession: YP_002547656
• Protein GI: 222106865
• COG category: [S] Function unknown
• COG ID: [COG1357] Uncharacterized low-complexity proteins

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTCG CTTTGTTCCA GGATGTTAAA AACACTGCCA GGCTTGCGTC CTGCCTGTTC 
TCTCTCGTTG TCGTCTCTAT GCTCGGAACG AACATTGCCC AGGCAGCCGA TTGCCGAAGC 
GGCCCAGCCA GCAAGGTGGA TTGGTCAGAA TGCCGCAAAC GGCAGTTGAT GCTGGGCGGA 
AGCGACCTTC GCGGTGCCAA TCTCTATGAT GCGGACTTGA GTTTTACTGA TTTGAGCAAT 
TCCAGTTTGC AGGCAGCCGA TCTGGAAAAG GCGACGTTGA TCCGCGCCTC TTTTGCTGGC 
GCCAATGCCG ACGGAGCGAA ATTCGACCGT ATCGAGTCCT ATCGCGCTGA GATGTCGGCA 
ATGTCTGGAG TGGACGCCAG TTTTGTCTCC GCTGAAATGC AGCGCGTCAA TTTAGGTGGC 
GCCAATCTGG CTGGTGCAGA CTTTACCAAG GCGGAACTCA GCCGGGTCAA TTTCGAAAAA 
TCCATCCTGA TGGGAGCCAA GTTCACAGTG GCAAACCTGT CCCGCGCCAG TTTCAATTTG 
GCGCGGCTGG ATGGTGGAGT CGATTTTGAA GACGCATTCC TGTTTCGCAC CCGTATTGAA 
GGTGTGGACC TGTCGACAGC CAAAGGGCTG AAACAGGACC AGGTCAACCT TGCCTGTGGC 
GATGCAAAGA CCAAGCTTCC CGCAGGCCTG ACCAATCCGT CCGATTGGCC CTGTCCTGCG 
GATTAA 

 

Protein sequence

MQFALFQDVK NTARLASCLF SLVVVSMLGT NIAQAADCRS GPASKVDWSE CRKRQLMLGG 
SDLRGANLYD ADLSFTDLSN SSLQAADLEK ATLIRASFAG ANADGAKFDR IESYRAEMSA 
MSGVDASFVS AEMQRVNLGG ANLAGADFTK AELSRVNFEK SILMGAKFTV ANLSRASFNL 
ARLDGGVDFE DAFLFRTRIE GVDLSTAKGL KQDQVNLACG DAKTKLPAGL TNPSDWPCPA 
D