| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5661 |
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| Symbol | |
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| ID | 7381132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 684532 |
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| End bp | 686193 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643649226 |
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| Product | ABC transporter nucleotide binding/ATPase protein |
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| Protein accession | YP_002547463 |
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| Protein GI | 222106672 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.755522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCAA ACCTCGTGGA AATCCGCGAC CTGAAGGTCC AGGCCACCAC CGATTCCGGC
CGCAAGGTCG AGATTATCAA GGGCATCAGC CTGGACATAC CGCAGGGTGA AATCGTTGCC
TTGATCGGCG AGAGCGGCTC TGGAAAAACC ACCATCGCCT TGACCTTGAT GGGCCATACC
CGCCCCGGAT GCCGTATAAC CGGCGGCACG ATCAGTGTCG CGGGCAAGGA TATGGCCGCA
CTTTCCGAGC GTGATCGCGC CGGTATTCGC GGAACCGATG TCGCTTATGT GCCGCAATCG
GCGGCGGCGG CTTTCAATCC GGCCATCCGC ATCATGGATC AGGTGATCGA GGTCACCCGC
ATTCACGACC TGATGTCGAA GGATGAAGCC CGCACCCGCG CCGTGGCGCT GTTTCGGGCG
CTGTCCCTCC CCAATCCCGA AACGATTGGC ACACGCTATC CGCATCAGGT CTCCGGCGGC
CAGTTACAAC GCCTGTCAGC GGCCATGGCG CTGATAGGAG ACCCGAAACT GGTGATTTTC
GACGAGCCGA CCACGGCGCT TGACGTGACG ACGCAGATCG AAGTGCTGCG CGCCTTCAAG
TCAGTGATGC GCAAGGACGG CATTTCCGGG GTCTATGTTT CCCATGATCT GGCCGTCGTC
GCCCAGATTG CCGACCGGAT CGTCGTGCTC AAGGGTGGCG AAGTGCAGGA AACCGGCACC
ACCGCCGAGC TGCTGGCGCA TGCGCAACAT CCTTATACCC GTGAACTTCT GTCTGCCTTT
GAACCGAAGC CCCGCACAAC ACCGCTTGCC GAAGACAAGA GCCTCAAGCC CCTGCTGGAA
ATCGAAAACC TGATTGCTGG CTATGGTGAT CTGCAAGCGG ATGGCCTGCC ACTCGTTCAG
GCGGTGCAGT CCGTCAGCCT GACGGTGCGT AATGGCCGCA ACCTCGGCAT TATCGGCGAA
TCCGGTTGCG GTAAATCCAC GTTAGCGCGC AGCATTGCCG GGCTCCTGCC ATTGGCGGCA
GGCCATATCA TTTTCAATGG CCGCGAACTG GGCCGTCATG CCCGCGACCG CACCCGCGAC
CAGCTACGTG AAATGCAGAT CGTCTTCCAA TCCGCCGATA CGGCGCTGAA CCCAGCCAAA
TCCATCGAGG ACATCCTCGG CCGTCCGCTG ACCTTTTACC ATGGAATGAA GGGCAAGGCG
CGCGATGCCC GCATCAACCA ATTGCTCGAC ATGGTGCATC TGCCGCAATC GCTGCGCCAG
CGCCGCCCCT CGGAACTGTC TGGCGGCCAG AAACAGCGGA TCAATTTCGC CCGGGCGCTG
GCAGCGGAAC CAAAGCTGAT TCTGTGCGAT GAAATCACCT CTGCGCTCGA CACCGTGGTC
GCCGCCGCCG TCATCGCGCT TTTGAAGGAA TTGCAGCGCG AACTTGGCCT GTCCTACATT
TTCATCAGCC ACGATCTTTC GGTGGTGGAA GCGATCTGCG ACGAGATCGT AGTGATGTAT
GCGGGCAAGA AGGTCGAGCA GATCTCGCCG CAACAGCTTA CCGCCCCGCA GCATCCCTAT
TCGAAACTGC TGTTTTCCTC GGTGCCGAAA CTCGACCCGA CCTGGCTCGA TACGCTGCAA
CAGGACCCGG AACTGGTGAG GACCTACCGC ATCAATCCGT GA
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| Protein sequence | MMANLVEIRD LKVQATTDSG RKVEIIKGIS LDIPQGEIVA LIGESGSGKT TIALTLMGHT
RPGCRITGGT ISVAGKDMAA LSERDRAGIR GTDVAYVPQS AAAAFNPAIR IMDQVIEVTR
IHDLMSKDEA RTRAVALFRA LSLPNPETIG TRYPHQVSGG QLQRLSAAMA LIGDPKLVIF
DEPTTALDVT TQIEVLRAFK SVMRKDGISG VYVSHDLAVV AQIADRIVVL KGGEVQETGT
TAELLAHAQH PYTRELLSAF EPKPRTTPLA EDKSLKPLLE IENLIAGYGD LQADGLPLVQ
AVQSVSLTVR NGRNLGIIGE SGCGKSTLAR SIAGLLPLAA GHIIFNGREL GRHARDRTRD
QLREMQIVFQ SADTALNPAK SIEDILGRPL TFYHGMKGKA RDARINQLLD MVHLPQSLRQ
RRPSELSGGQ KQRINFARAL AAEPKLILCD EITSALDTVV AAAVIALLKE LQRELGLSYI
FISHDLSVVE AICDEIVVMY AGKKVEQISP QQLTAPQHPY SKLLFSSVPK LDPTWLDTLQ
QDPELVRTYR INP
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