Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5547 |
Symbol | galE |
ID | 7381456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 545185 |
End bp | 546078 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643649128 |
Product | UDP-glucose 4-epimerase |
Protein accession | YP_002547365 |
Protein GI | 222106574 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGC GTATCGTCTT TACGGGCGGC ACCGGCAAGG CTGGACGCCA TGCCGTTCCG CATCTGCAAG CCAAGGGATA TTCGATCCTC AACCTTGATC TGAAGCCGCT CGACTGCCCT GGCGTCAATA CGCTGATCAC TGATATCACC GATAGCGGCC AGGTGTTCAA CGCGCTGACG ACGCATTTCG GTTTTGATGG ATATGATCAC GGCGCCCCGC CTTCGGCGCC CGACGCCGTC GTGCATTTCG CTGCCATTCC CCGGGTGATG ATCGAGCCTG ACAATTCCAC CTTTTCGGCC AATGTCGTCG GCACCTATAA TGTCATCGAG GCGGCCATGA AGCTTGGGGT GCGCAAGGTG ATCATCGCTT CGAGCGAAAC CACCTATGGC GTCTGTTTTG CCGAAGGCGA CAAGGAGTTC CATAGTTTTC CGCTTGAAGA AGACTATGAC AGCGACCCGA TGGACAGCTA CGGTCTGTCC AAGGTGGTCA ATGAAAAGAC CGCCCGGGCC TTTGCCATGC GCTACAAGGC CGATATCTAT GCGCTGCGGA TTGGCAATGT GATCGAGCCG CATGACTATG CCAATTTCCC TGGCTATCTC GATAACCCCA TGTCGCGCAA GCGCAATGCC TGGAGCTATA TCGACGCCCG CGACCTCGGC GAAATCGTCC ATTTGTGCAT CGAAAAGGAC GGCCTCGGTT TCCAGGTGTT CAATGCCGTC AACGACACGA TCACCGCCGA TCTGCCGACC CGTGAATTTC TTGCCAAATA TTGCCCCGAC ACGCCGGTTC TACGGGAGAT GGGTGAGAAT GAGGCACCAA TTTCCAACCG GAAGGCCCGC CAGGTGCTTG GTTTTAAGGA AGAGCATCCC TGGCGCAAAT ATGTGACGCG CTGA
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Protein sequence | MNKRIVFTGG TGKAGRHAVP HLQAKGYSIL NLDLKPLDCP GVNTLITDIT DSGQVFNALT THFGFDGYDH GAPPSAPDAV VHFAAIPRVM IEPDNSTFSA NVVGTYNVIE AAMKLGVRKV IIASSETTYG VCFAEGDKEF HSFPLEEDYD SDPMDSYGLS KVVNEKTARA FAMRYKADIY ALRIGNVIEP HDYANFPGYL DNPMSRKRNA WSYIDARDLG EIVHLCIEKD GLGFQVFNAV NDTITADLPT REFLAKYCPD TPVLREMGEN EAPISNRKAR QVLGFKEEHP WRKYVTR
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