| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5494 |
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| Symbol | |
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| ID | 7381414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 491364 |
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| End bp | 492284 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643649086 |
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| Product | Nucleoside-diphosphate-sugar epimerase |
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| Protein accession | YP_002547323 |
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| Protein GI | 222106532 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTC TTGTGACCGG TGCTGATGGC TTTCTCGGAC GCGGGCTCGT GGCTCGTCTC
CCGTTCGCTC TTCACCAGGC AAAGCGGATC GTTGTCACAG ACCGAGCCTT TGCTCAACCT
GTCCCTGACG GGATTGAGGC CTTGGTCGGT GATCTCGGCG ATCCCGGCTT TCTGGACACA
TTGCTGGAAC CCGGTTTCGA TCTAGTCTTC CATCTGGCCA GCGTTCCCGG AGGACTTGCC
GAGCGCGAAC AGGCGCTGGG ACATGGTGCA AACCTGCTTG CGCCGATTGC TTTGGCGCAA
GGCGTCGCAC TTCGCCAGCC CGGCGCGAGG CTGGTGTTTG CCTCCTCCAT CGCGGTCTAT
GGTGCGCTTG GAGCGGCAAC CGTCACGGCG CAGACGCTTG CCGCGCCGCA GTTGACCTAT
GGCGCCCACA AGCTGATGAC CGAAATTCTG TTGTCCGACA TGACGCGACG CGGTGCGCTT
TCAGCCATCA GTCTGCGGTT TCCCGGCATT GTCGCACGGC CTGCGACCGA TAGCGGGCAT
GGTTCGGCCT TTATGAGCCT GCTTTTCCAT CGGATCGCTG CCGGAGAAGC CTATGCCTGT
CCGGTTCCGG CGAAAAGCAC CTGCTGGTGG GTCTCGCGGC AGGCGGCGGT GGATATGCTG
CTGCATGCCG CAGGGCTGAA GGATAGTGCC GTAACCGTTG TCCAGCCGCC GGTACTGTTT
GCAACGACCG GCGACGTGGC CGCTGCTGTC GCCCGCCATG TGGGCAAAAC CGCATTGGTC
GAATGGGGTG AGGACGACAT GCTTCGCCGC CTGTTTGGTG CGATGCCGCC GCTTGATGCT
GCCACGGCGT TGGCGGCGGG CTTCAAGGCC GATGCTGATC TCGACGCGCT TGCCAAAGCC
GCAATTTCAG GAGAGTCATG A
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| Protein sequence | MRILVTGADG FLGRGLVARL PFALHQAKRI VVTDRAFAQP VPDGIEALVG DLGDPGFLDT
LLEPGFDLVF HLASVPGGLA EREQALGHGA NLLAPIALAQ GVALRQPGAR LVFASSIAVY
GALGAATVTA QTLAAPQLTY GAHKLMTEIL LSDMTRRGAL SAISLRFPGI VARPATDSGH
GSAFMSLLFH RIAAGEAYAC PVPAKSTCWW VSRQAAVDML LHAAGLKDSA VTVVQPPVLF
ATTGDVAAAV ARHVGKTALV EWGEDDMLRR LFGAMPPLDA ATALAAGFKA DADLDALAKA
AISGES
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