| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5193 |
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| Symbol | dapA |
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| ID | 7381328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 191548 |
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| End bp | 192489 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648841 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_002547078 |
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| Protein GI | 222106287 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCA GCAAAGCTCA ATCTATCCAA GGTATTATTC CCGTCATGCT CACGCCTTTT
CTTGAGGATG GGCAGATCGA TTACCCCGGT CTGGAACGCC TCATCGAATG GTATGTCGCC
AACGGCTCCG GGGCCTTGTT CGCAGTGTGC CAGTCCAGCG AGATGATGTT CTTGTCGCTG
GATGAGCGTA TGGCGCTGGG TCGTTTCGTG GTGGAAAAGG CAGCGGGTCG CCTTCCAGTC
GTTGTGTCCG GCCATATCAG CGACGATCTG GACAAGCAGA TTGAGGAATT ACAGGCCATG
AGCCGGGTTG GCGCAGATGG GCTAATCCTC GTGACCAACC ATCTCGACCC TAAGAAAGAA
GGCACAGCTG TCTTCAAGGC AACGCTGGAT AAGCTGCTGT CCGTGCTGCC GGAGGACCTG
CCGCTTGGTC TTTACGAGTG CCCGGCCCCT TATCGCCGTT TGCTGAGCGA TGAGGAACTG
ACCTATTGCG CCCACACCGG TCGTTTCATC ATGCTCAAGG ATGTGAGCTG CGATCTTGAC
ACGGTCAAGC GTCGCCTCGA ACTGACCAAA GGCACACCGC TGAAAATCCT CAATGCCAAT
GCGGCCATTG CCTGGGATGC GATGAAGGCT GGCGTGCCGG GCTTCAACGG CGTTTTCACC
AATTTCCACC CCGATCTTTA CAACTGGCTG TGGCGTGAGG GTGAAAAGCA TCCACAGCTC
GCTGAAGAGC TGGCCACCTT CCTGGTACTG TCGGCTGTTT CGGAAGCTCT CGGCTATCCG
GCACTCGCCA AACTCTATCA TCAGCGGATT GGCACCTTTG ACAGTATTCG CTGCCGGGTG
ATCGATTATG ACATTCGGGA GCGCTTCTGG GCACTGGACG CCGTGCTGGA CAAAATCATC
GACGGTACCG AGCATTTCCG CAACCGGATC GCCAAACTCT GA
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| Protein sequence | MMTSKAQSIQ GIIPVMLTPF LEDGQIDYPG LERLIEWYVA NGSGALFAVC QSSEMMFLSL
DERMALGRFV VEKAAGRLPV VVSGHISDDL DKQIEELQAM SRVGADGLIL VTNHLDPKKE
GTAVFKATLD KLLSVLPEDL PLGLYECPAP YRRLLSDEEL TYCAHTGRFI MLKDVSCDLD
TVKRRLELTK GTPLKILNAN AAIAWDAMKA GVPGFNGVFT NFHPDLYNWL WREGEKHPQL
AEELATFLVL SAVSEALGYP ALAKLYHQRI GTFDSIRCRV IDYDIRERFW ALDAVLDKII
DGTEHFRNRI AKL
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