| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5140 |
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| Symbol | |
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| ID | 7380943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 129387 |
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| End bp | 130469 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643648796 |
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| Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
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| Protein accession | YP_002547033 |
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| Protein GI | 222106242 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0880635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACCG TTGAACTCAA AGGTGTGGCT AAGCGCTACG GTGCCTTGAA GGTCATTGAT
GACATTGATC TTGACCTTGA AGATGGCTCC CTGACCGTCT TTGTGGGGCC ATCCGGCTGT
GGCAAATCCA CCCTGCTGCG GATGATCGCC GGGCTTGAGC CGATCACTAG CGGCGACATT
CTCATCGATG GTCAACGCAT TAACGATGCC ACGCCCACCG AGCGCGGTGT GGCCATGGTG
TTTCAGAATT ACGCCCTCTA TCCGCATATG ACGGTGCGCA ACAATATCGG TTTTCCACTG
CGCATGGCGG GCATGAAAAG CGCCGACATC GGACGGCGGG TGGAACAGGC GGCAAACCGT
TTGCACATCA CGCCGCTTCT GGAGCGCAAG CCTGCCGCCT TGTCTGGTGG CCAACGCCAG
CGGGTGGCCA TCGGGCGGGC CATCGTGCGC GATCCCAACG TGTTCCTGTT CGATGAGCCG
CTCTCCAATC TCGATGCCGA ATTGCGAGTG AAAATGCGGC TTGAGATTGC CGAACTGCAT
CGGTCATTGG CGTCAACCAT GATTTACGTA ACCCACGATC AGGTGGAAGC CATGACCTTG
GCTGATCGGA TCGTGGTGTT GCGGGCGGGC AATGTCGAGC AGATTGGCAC GCCGATCAGC
CTTTATGACG ACCCCGACAA CATGTTTGTT GCCGGTTTCA TCGGCTCACC GCGCATGAAT
TTTCTGGCCG GTCATGTCGT GGCGCGCAGC ACAGCGGCAA TCCGCGTCAA GCTCAGCGAG
TTCAAGGACG TGGAATTCGA ACTTGCAATG GGTTCAGACC TTGCCCCCGG TGCAAAGATT
TCCATTGGCA TGCGGCCAGA GAATTTTTCC TCTGACGGAT CAGCCCGGTT CGACCTGCGG
GTGGACATGG TGGAGAGCCT CGGCGGTGTT TCCTATGGCT ACAGTAATAT GCGCGGCGAA
GATGCCCTGA CGGTTGATCT GAAGGGCGAC CGATCCGTGC GGGCCGGCGA TACGATCCAC
ACCGGTTTTC ATCCGTCCAA GGCCCTGCTG TTTGATCCGG CCAGCGGTGC GCGCCTTCGG
TGA
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| Protein sequence | MATVELKGVA KRYGALKVID DIDLDLEDGS LTVFVGPSGC GKSTLLRMIA GLEPITSGDI
LIDGQRINDA TPTERGVAMV FQNYALYPHM TVRNNIGFPL RMAGMKSADI GRRVEQAANR
LHITPLLERK PAALSGGQRQ RVAIGRAIVR DPNVFLFDEP LSNLDAELRV KMRLEIAELH
RSLASTMIYV THDQVEAMTL ADRIVVLRAG NVEQIGTPIS LYDDPDNMFV AGFIGSPRMN
FLAGHVVARS TAAIRVKLSE FKDVEFELAM GSDLAPGAKI SIGMRPENFS SDGSARFDLR
VDMVESLGGV SYGYSNMRGE DALTVDLKGD RSVRAGDTIH TGFHPSKALL FDPASGARLR
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