Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5090 |
Symbol | |
ID | 7380903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 83201 |
End bp | 84412 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648756 |
Product | dihydroorotase |
Protein accession | YP_002546993 |
Protein GI | 222106202 |
COG category | [R] General function prediction only |
COG ID | [COG3964] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTCTC CGCACCAAGC CCAGACACCA TTGCTTTTGA AAAACCTCCG CCCTCTGGCC TTTGGCGAGG CAACACCGCC GCAGGCCATC GATATTTTGA TTGGCGCGGA TGGCAAGATC ATCAAGGTCG GACAAAACAT CGCCCTGACA GAAGAGGCCG AAGTCATTGA TGGCAAAGGG GCCTGGATTT CGCCCGGCTG GGTCGATCTG CATGTGCATA TCTGGCATGG CGGCACGGAT ATTTCCATTC GCCCATCGGA ATGCGGGGCC GAACGCGGCG TGACCACGCT GGTCGATGCA GGCTCCGCCG GAGAGGCCAA TTTCCACGGT TTTCGCGAGT ATATCATTGA GCCATCGCGG GAGCGGATCA AGGCATTTTT GAACCTTGGC TCCATTGGTC TGGTGGCCTG CAACCGCGTG CCGGAACTGC GCGACATCAA GGATATCGAT CTCGACCGCA TTCTGGAATG CTACGCGGAC AACAGCGAGC ATATCGTGGG CCTGAAAGTG CGGGCCAGCC ACGTCATCAC CGGATCATGG GGCGTAACCC CGGTCAAACT CGGCAAGAAA ATCGCCAAAA TCCTGAAAAT TCCGATGATG GTGCATGTTG GCGAACCGCC AGCGCTCTAT GACGAAGTGC TGGAAATCCT CGGCCCCGGC GATGTCGTGA CCCACTGCTT CAACGGCAAG GCCGGGTCCA GCATCATGGA AGACGAAGAC CTTTATAACC TCGCCGAGCG CTGCGCTGGC GAAGGAATCC GGCTGGATAT CGGCCATGGC GGTGCCTCCT TCTCGTTCAA AGTGGCAGAA GCGGCCATCA AACGGGGGCT TTTGCCCTTT TCGATCTCCA CCGATCTGCA TGGCCATTCG ATGAATTTTC CGGTCTGGGA TCTGGCCACC ACCATGTCCA AACTGCTCTC CGTGGGCATG CCGTTTGAGA AGGTGGTGGA GGCCGTGACC CATGCACCAG CCTCCGTTAT CCGCCTGTCG ATACAGGATC GGCTGGTGCC GGGAGCGCGG GCCGATTTCA CCATTTTCGA TCTGGTCGAT TCCGATCTCG AAGCCACGGA TTCCAACGGC GATGTTGCCC GCCTGACCCA GCTGTTTGAG CCGCGCCATG CCGTGATTGG CCGCGAGGCC ATTGCCGCCA GCCGCTACAT CCCTCGCGCC CGCAAGCTGG TGCGCCACAG CCATGGGTAC TCGTGGCGCT GA
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Protein sequence | MLSPHQAQTP LLLKNLRPLA FGEATPPQAI DILIGADGKI IKVGQNIALT EEAEVIDGKG AWISPGWVDL HVHIWHGGTD ISIRPSECGA ERGVTTLVDA GSAGEANFHG FREYIIEPSR ERIKAFLNLG SIGLVACNRV PELRDIKDID LDRILECYAD NSEHIVGLKV RASHVITGSW GVTPVKLGKK IAKILKIPMM VHVGEPPALY DEVLEILGPG DVVTHCFNGK AGSSIMEDED LYNLAERCAG EGIRLDIGHG GASFSFKVAE AAIKRGLLPF SISTDLHGHS MNFPVWDLAT TMSKLLSVGM PFEKVVEAVT HAPASVIRLS IQDRLVPGAR ADFTIFDLVD SDLEATDSNG DVARLTQLFE PRHAVIGREA IAASRYIPRA RKLVRHSHGY SWR
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