| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4300 |
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| Symbol | |
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| ID | 7386542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 3615264 |
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| End bp | 3616598 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643652958 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_002551129 |
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| Protein GI | 222150172 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0300488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACGTA GGGCTTCTAT AATGCTGGTT GGCGCGCTGA TGGGCGCGAC GGCGATGAGC
GTTGTTTATT CGGCTGGCGT TCCTGCCCAG GCGGCAGGCA ATTCCACTTA CAAGGAACTG
GCGATTTTTG GAGACGTGTT TGAGCGTGTC CGCGCTCAGT ATGTCACGCC TCCTGACGAG
AAAAAGCTGG TCGAAGCCGC CATCAATGGC ATGTTGAGCT CTCTCGATCC CCATTCCAGC
TACATGAACG CCCAGGAAGC GGCGGACATG CAGACCCAGA CCAAGGGTGA ATTTGGTGGC
ATCGGCATCG AAGTGACGAT GGAAAACGAC CTGGTCAAGG TCATCACCCC CATCGATGAC
ACACCCGGCG CCAAGGCCGG CATTCTGGCT GGCGACATGA TCTCCGAGAT CAATGGCACC
CCCGTGCGCG GCATGCAGCT GAATGACGCT GTTGAAAAGA TGCGCGGCGC GGTCAATACC
CCGATCAAGC TGACCATTTT GCGCAAGGGT GCTGACAAGC CGATCGAGAT GAGCGTCATG
CGCGAAATCA TCCCGATCCG CGCCGTCAAG TCTCGCGTCG ATGGCGATGT CGGCTATGTC
AGGGTGATTT CCTTCACCGA AAAGACCTAT GACGACCTGG AAGCCGCGAT CAACAAGATC
AAGAAGGAAG TGCCAGCCGA TAAGCTGAAG GGCTTCGTTC TCGACCTGCG CCTCAATCCG
GGCGGTCTGC TCGATCAGGC GATTTACGTC TCCGACGCCT TCCTGCAGAA GGGCGAAATC
GTCTCCACCC GCTCGCGCGA TCCGGAAGAT ACCCGCCGCT TCAATGCCAC CGCTGGCGAT
CTGACCGATG GCAAGCCGCT GATCGTGCTG GTCAATGGTG GTTCGGCCTC GGCATCTGAA
ATCGTCGCTG GCGCGCTTCA GGATCTGAAG CGGGCAACAG TGGTCGGCAC CCGCAGCTTC
GGCAAGGGTT CCGTGCAGAC CATCATCCCG ATGGGCGACA AGGGCGCGCT GCGCCTGACG
ACGGCGCTCT ATTACACGCC ATCAGGCAAG TCGATCCAGG GGACTGGCAT CCATCCTGAT
ATCAAGGTGG AAGAGCCGCT GCCCGCCGAT CTGCAGGGCA AGCTGCGCAC CGAGGGCGAA
TCCTCGCTGC CGGGCCATAT CCAGGGCCAG AGCGAGACGG AAGAAGGCTC CGGCTCGGTT
GCCTATGTGC CGCCGGATCC GAAGGATGAC GTGCAGCTTA ACTACGCACT CGACCTGCTG
CGCGGCGCCA AGACAGACCC GTCCTTCCCG CCCGACCCAA GCAAGGCCGT GCTGGAAAGC
GCCAAGAAGA AGTAA
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| Protein sequence | MIRRASIMLV GALMGATAMS VVYSAGVPAQ AAGNSTYKEL AIFGDVFERV RAQYVTPPDE
KKLVEAAING MLSSLDPHSS YMNAQEAADM QTQTKGEFGG IGIEVTMEND LVKVITPIDD
TPGAKAGILA GDMISEINGT PVRGMQLNDA VEKMRGAVNT PIKLTILRKG ADKPIEMSVM
REIIPIRAVK SRVDGDVGYV RVISFTEKTY DDLEAAINKI KKEVPADKLK GFVLDLRLNP
GGLLDQAIYV SDAFLQKGEI VSTRSRDPED TRRFNATAGD LTDGKPLIVL VNGGSASASE
IVAGALQDLK RATVVGTRSF GKGSVQTIIP MGDKGALRLT TALYYTPSGK SIQGTGIHPD
IKVEEPLPAD LQGKLRTEGE SSLPGHIQGQ SETEEGSGSV AYVPPDPKDD VQLNYALDLL
RGAKTDPSFP PDPSKAVLES AKKK
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