| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4270 |
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| Symbol | rpoH2 |
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| ID | 7386518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3590202 |
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| End bp | 3591059 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643652933 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_002551105 |
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| Protein GI | 222150148 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTCCC TGCAGGCCGA TAAGAAGCTC ATCAGGATTG CAATGGCCGC ACCGTATCTG
GAGCGCCAGG AGGAGCATGA TCTGGCGGTA CGCTGGAAAC ATGGCAACGA TCAGGTGGCC
CGAAACCAGA TTGCCCATGC CCATATGCGG CTGGTGATTG CCATGGCTTC CAAGTTCCGT
GGCTTCGGCC TACCGCTCGG CGATCTCATT CAAGAAGGCT ATATAGGGCT GCTGGAAGCT
GCGGCAAGGT TTGAGCCGAC CCGTGATGTG CGTTTTTCGA CCTATGCCGG TTGGTGGATT
CGCGCCTCCA TGCAGGATTA TATCCTGCGC AACTGGTCCA TCGTGCGCGG CGGCACCAGT
TCCTCCCAGA AGGCGTTGTT TTTCAATCTA CGCCGGTTGC GGGCAAAGCT TGCCCAGGGC
GATCAACGCT TGACCGATCA GGCTATCCAC CAGGAAATTG CCACCGCGCT TGGTGTCAGC
CTTGCCGATG TCCAGTCGAT GGACGCCCGG CTCTCTTCCA ATGATACCTC CCTGCAAGCA
CCGATTTCCA ACAATGGTGA AGAGGGTGCC GAACGGCTGG ATATGCTGGC CAGCGATGAG
CCGACACCGG ACGAGCAGGT GACGGATATG ATCGATACCG AGCGTCGCCT GGATTGGCTG
CGCGGCGCCA TGGCCCATCT GAATGAGCGT GAAATGCGCA TCATTCGCGC CCGGCGACTT
TCGGAGGACG GTGCAACGCT TGAGGAGCTG GGCTGTGAGC TTGGTATTTC CAAGGAGCGG
GTGCGCCAGA TCGAGACCCG GGCGATGGAA AAGCTGAAGG TCGCGCTGGT TCAGGCCAAT
CCACAGATGG TGGCCTGA
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| Protein sequence | MNSLQADKKL IRIAMAAPYL ERQEEHDLAV RWKHGNDQVA RNQIAHAHMR LVIAMASKFR
GFGLPLGDLI QEGYIGLLEA AARFEPTRDV RFSTYAGWWI RASMQDYILR NWSIVRGGTS
SSQKALFFNL RRLRAKLAQG DQRLTDQAIH QEIATALGVS LADVQSMDAR LSSNDTSLQA
PISNNGEEGA ERLDMLASDE PTPDEQVTDM IDTERRLDWL RGAMAHLNER EMRIIRARRL
SEDGATLEEL GCELGISKER VRQIETRAME KLKVALVQAN PQMVA
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