| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3957 |
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| Symbol | lysC |
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| ID | 7387305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3334366 |
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| End bp | 3335640 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652695 |
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| Product | aspartate kinase |
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| Protein accession | YP_002550870 |
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| Protein GI | 222149913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCA TTGTGATGAA ATTCGGCGGT ACATCCGTCG CCAATCTTGA ACGCATTCAC
AACGTGGCGC GGCATGTGAA ACGTGAAGTG GATGCCGGCC ACGAAGTTGC CGTGGTGGTT
TCGGCCATGT CCGGCAAGAC CAACGAATTG GTGGACTGGG TCCAGACCAT GCCCAAGGTC
GCCGGTGCTG CTTCGCCTTT CTATGATGCG CGTGAATATG ACGCTATCGT GGCCTCCGGT
GAACAGGTGA CATCCGGTCT GCTTGCCATT GCGCTGCAAT CGCTCGGTAT CAATGCCCGC
TCCTGGCAGG GCTGGCAGAT TGCCATTAAG ACCGACAATG CGCATGGCGC GGCCCGCATC
CAGGACATCG ACGGTTCCGA TATCATCCGC CGCATGGGTG AGGGCCAGGT CGCCGTGGTG
GCCGGTTTCC AGGGCATTGG CCCGGACAAT CGCATTGCCA CGCTGGGCCG CGGCGGGTCC
GATACCTCGG CGGTGGCAAT CGCGGCAGCC GTCAAGGCCG ACCGTTGCGA CATCTATACC
GATGTCGATG GTGTCTATAC CACCGATCCA CGCATCGAGC CAAAAGCGCG CCGCCTGAAA
AAGGTAGCGT TTGAGGAAAT GCTGGAAATG GCTTCGCTTG GCGCCAAGGT ATTGCAGGTG
CGCTCCGTCG AACTGGCCAT GGTACACAAG GTGCGCACCT TCGTGCGCTC GAGCTTTGAA
GATCCCGATG CTCCGGGCAT GGGTGACGTG CTGAATCCGC CCGGAACGTT GATTTGCGAT
GAGGAAGAGA TCGTGGAACA GGAAGTTGTT ACCGGCATTG CCTATGCCAA GGACGAAGCC
CAGATATCCC TGCGCCGGTT GGCTGACCGT CCCGGTGTTT CGGCGGCGAT TTTCGGACCG
CTGTCCGAAT CGCATATCAA TGTCGATATG ATCGTCCAGA ATATTTCCGA GGACGGTTCC
AAGACCGATA TGACCTTTAC CGTCCCATCC GGGGATGTGG ATAAAGCCTT GAAAGTGCTC
TCCGACAACC AGGAAAAAAT CGGTTTCGAC GTGGTGCAAA GCGAAAAGGG CCTGGTCAAG
GTCTCGGTGA TCGGCATTGG CATGCGCAGC CATGCAGGGG TTGCGGCGAC CGCTTTCCGT
GCACTTGCCG ATAAAGGCAT CAATATCAAG GCGATCACCA CCTCCGAGAT CAAGATTTCC
ATCCTGATCG ACGGTCCTTA CGCCGAATTG GCTGTTCGCA CTTTGCATTC CTGCTACGGT
CTCGATAAGG CTTGA
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| Protein sequence | MARIVMKFGG TSVANLERIH NVARHVKREV DAGHEVAVVV SAMSGKTNEL VDWVQTMPKV
AGAASPFYDA REYDAIVASG EQVTSGLLAI ALQSLGINAR SWQGWQIAIK TDNAHGAARI
QDIDGSDIIR RMGEGQVAVV AGFQGIGPDN RIATLGRGGS DTSAVAIAAA VKADRCDIYT
DVDGVYTTDP RIEPKARRLK KVAFEEMLEM ASLGAKVLQV RSVELAMVHK VRTFVRSSFE
DPDAPGMGDV LNPPGTLICD EEEIVEQEVV TGIAYAKDEA QISLRRLADR PGVSAAIFGP
LSESHINVDM IVQNISEDGS KTDMTFTVPS GDVDKALKVL SDNQEKIGFD VVQSEKGLVK
VSVIGIGMRS HAGVAATAFR ALADKGINIK AITTSEIKIS ILIDGPYAEL AVRTLHSCYG
LDKA
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