Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3779 |
Symbol | |
ID | 7388233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 3146108 |
End bp | 3147169 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643652549 |
Product | nucleoside-diphosphate-sugar epimerase protein |
Protein accession | YP_002550730 |
Protein GI | 222149773 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGGAT CAGCATTGGT TGTCGGCGCA AGCGGCATTG TTGGCAGTGC GACGGTGGAT CTCCTGTTGG CGAAGGGATG GGCCGTGTAC GGACTGGCCC GGTCGCCGGT TGCCAAAGAC GGCATGCAGC CCGTGGCCGC CGATCTTCAG GACAGTGAGG CGACAGCGCG GGCTCTTTCC GATGTGAAAC CCGACGTGGT GTTCATCTCG ACATGGGCGC GGCAATCAAG CGAGGCGGAA AACATCCGGG TCAATGCGGC GATGGTGCGT AACGTGCTTG ACGCGCTGCG TCCCGCAGGG TCCGTCGCCC ATGTGGCATT GGTCACGGGG CTCAAACATT ATCTCGGCCC CTTCGAGGCC TATGGCAAGG GTACGCTGCC GCAGACACCA TTCCGGGAAG ATCAGGGCAG GCTGGATGTC GAGAATTTTT ACTATGCGCA GGAAGATGAA GTGTTTGCCG CAGCAAAGCG CGACGGATTT TCCTGGAGCG TGCATCGCCC CCATACGGTG ATCGGCAAGG CAGTTGGCAA TGCCATGAAC ATGGGAACGA CGCTGGCCGT CTATGCGACG CTCTGCCGGG AAACCGGGCG ACCCTTCCGT TTCCCCGGTT CTTCCGTGCA ATGGAACGGT CTGACGGATA TGACTGATGC TGGCGTTCTG GCCGAACAAT TGCTCTGGGC CGCAACGACC CCGCAATGCC GCAACCAGGC CTTCAACGTG GTCAATGGCG ATATTTTCCG CTGGAGTTGG ATGTGGGGCC GGATTGCCAA TTGGTTTGGG CTGGAACCGG CGCCGTTTGA CGGGACGATC CTGCCGCTGG AACAGCAGAT GGCAGAGGAC GCCGCCATCT GGCGGGAGCT CGCCGAGCGC CATGGCCTGA TCGAAAAAGA CCTGTCGCGC CTGGCCTCAC CTTGGCATAC GGACGCCGAT CTTGGGCGGC CGATTGAAGT GGTGACCGAC ATGAGCAAGA GCCGGGTGAT GGGCTTTGAC CGCTACCAGC CCACCGACGA GGCGTTTTTC ACCCTGTTTG GGCAACTGCG TGGGGAAAGG CTCATTCCTT GA
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Protein sequence | MVGSALVVGA SGIVGSATVD LLLAKGWAVY GLARSPVAKD GMQPVAADLQ DSEATARALS DVKPDVVFIS TWARQSSEAE NIRVNAAMVR NVLDALRPAG SVAHVALVTG LKHYLGPFEA YGKGTLPQTP FREDQGRLDV ENFYYAQEDE VFAAAKRDGF SWSVHRPHTV IGKAVGNAMN MGTTLAVYAT LCRETGRPFR FPGSSVQWNG LTDMTDAGVL AEQLLWAATT PQCRNQAFNV VNGDIFRWSW MWGRIANWFG LEPAPFDGTI LPLEQQMAED AAIWRELAER HGLIEKDLSR LASPWHTDAD LGRPIEVVTD MSKSRVMGFD RYQPTDEAFF TLFGQLRGER LIP
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