Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3033 |
Symbol | |
ID | 7388602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2523430 |
End bp | 2524461 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643652007 |
Product | hypothetical protein |
Protein accession | YP_002550191 |
Protein GI | 222149234 |
COG category | [R] General function prediction only |
COG ID | [COG2842] Uncharacterized ATPase, putative transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00438308 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGC ACATCAACAC AAGTCAGTTT AACGGCGCTT CCTGGGAGCG CCCCGTCCAG GCACCTGAGG TTTCTGCAAA CAAGAGTGAT GCCGATATCG AAAAGTGGTG GGAGCTGATT GACCGCGTTA TTGCCGTTGC CCGGCAGTTC CGGTGGACGA AGGCGGAAGT TACCCGCCGG TCGGGCATGA AGGAAGGCAC GTTTAGCCAG TGGTTTTCCG GCCGCTACGA AGGGCGGCTG GACGGTCACA ACACCATGAT TGAACAATGG CTGGATGCCT TGGAAGCCAG TGCCAGCATT GCGGCGATGA TTCCGCAATC GCCGCCCTTC ATGAAGCTTC GCGGTTCGGC GGAGGTGCTG GAAACGCTGA CGTGGGCGCA GATTTGCCCC GATCTGGTGA TGATCACGCT GGGCGCTGGC ATGGGCAAGA CCGCGACATG TGAGTATTTC ACCAACACGC GCCCGCATGT CTATCACGCC ACCGTTTCTG AGAGCACCAA GACGGTTCAC GGCATGTTGA CGGAGCTGGC CGAGCAGCTC GCGGTTCAGG AGAACAACCC GGCGCGTCTG GCGCGGGCGA TCGGGACCAA GTTGAAGCGG ACCGGTGACG GGACGTTGCT GATCGTTGAC GAGGGCCAGC ACCTTAACGA CGAGGCGCTC AACCAGCTTC GCCATTTCGT GGATGTGTAC AAATGCGGTG TGGCCGTCGT TGGCAACTCG GAGGTCTATA GCCGGTTTGC CAGCAACAAA AAGGGGCCGA GTTATGCCCA GCTGAAAAGC CGCATCGGTA AGCGCCTGCA ACGGGTGCAG CCCTATCCGG ATGACTTGCA AACCTACATT GCCGCCTGGA ATGTAACCGA TCCGGCCTGC ATCAAGTTTC TGATGGGCAT CGGCTTGAAG GGCGGTGCCT TCCGGCAGAT CGAAAAGACA ATGCGCATGG CCTTGATGGT GGCGCTTGGG GCAGGGACCG AGGTTGGCTT AAAGGACATT CAGGCCGCCT GGAAGAACCG CGACGTGGAG GACATGGCAT GA
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Protein sequence | MNKHINTSQF NGASWERPVQ APEVSANKSD ADIEKWWELI DRVIAVARQF RWTKAEVTRR SGMKEGTFSQ WFSGRYEGRL DGHNTMIEQW LDALEASASI AAMIPQSPPF MKLRGSAEVL ETLTWAQICP DLVMITLGAG MGKTATCEYF TNTRPHVYHA TVSESTKTVH GMLTELAEQL AVQENNPARL ARAIGTKLKR TGDGTLLIVD EGQHLNDEAL NQLRHFVDVY KCGVAVVGNS EVYSRFASNK KGPSYAQLKS RIGKRLQRVQ PYPDDLQTYI AAWNVTDPAC IKFLMGIGLK GGAFRQIEKT MRMALMVALG AGTEVGLKDI QAAWKNRDVE DMA
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