| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2879 |
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| Symbol | recN |
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| ID | 7385989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2398514 |
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| End bp | 2400187 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643651898 |
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| Product | DNA repair protein RecN |
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| Protein accession | YP_002550083 |
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| Protein GI | 222149126 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCC AGCTTTCGAT CCGCGACATC GTCTTGATCG AGCGGCTCGA CCTTGACTTT
TCGGCCGGTC TGTCTGTGCT GACCGGCGAA ACGGGGGCGG GGAAATCCAT TTTGCTCGAC
AGTCTGTCGC TCGCCCTTGG CGGGCGCGGC GATGGCTCGC TTGTGCGTCA TGGTGAAGAC
AAGGGCCAGG TGACGGCGGT GTTCGATGTC GCCATCAGCC ATCCGGCCCG AATCATGCTG
CGCGAAAACG GCATCGATGA CGATGGCGAC CTGATTTTCC GTCGGGTGCA ATCCGCCGAT
GGCCGCACCC GTGCCTATGT CAACGACCAG CCGATCAGTG TGCAGCTGAT GCGCCAGGCC
GGGCAATATC TGGTCGAAAT CCATGGACAG CATGATGACC GGGCGCTGGT GGATACCGCT
GCCCACCGCC TGCTGCTGGA CGCCTTTGCG GGGCTGACCG AAGAAGCGCA GGCGCTGGGC
GACAGCTATC GCCGCTGGCG TGAGGCCGAG CGGGCCTTCA AGATCCACAA GGCCAAGGTT
GAGGCTGCGG CCCGTGAGGC CGACTATCTG CGTGCCTCGG TCGAGGAGTT GGAAGGCCTC
AGCCCCCAGG ATGGCGAGGA AGAGGATCTG GCCGAGCGCC GCTCCCGGAT GCAGAAATCC
GAGCGAATCG CGGGCGATAT CGCCGAGGCC AGTGAATTCC TGAATGGAAA TGCTTCGCCC
GTGCCAATGA TCGCCTCGCT GATGCGCCGC CTGGAGCGCA AGAGCGGCGA AGCCCCGGGC
CTGCTGGAGG ACACGGTCAG CCTGCTGGGA ACGGCACTGG ACACATTATC GAGCGCCCAG
ATGGAGGTCG AATCGGCGCT GCGTCGCACG GAGTTTGATC CACGCGAGCT GGAGCGGGTT
GAGGAACGGC TGTTTGCGCT GCGCGCAGCA GGCCGTAAAT ATTCCGTGGC TGTTGCCGAT
CTTCCGGCCC TTGCCGAAAA GATGATCACC GATCTGGCCG ATCTCGATGC CGGTGAGGAA
AAGCTCGGCG CGTTGGAAAA GGCTGTGGCC GAGACCAAGG CTGTCTATTT CGCCAGTGCG
CAATCCCTGT CGCAGAAGCG CCAGAACGCA GCCTCTTCGC TGGCCGACGC AGTGATGGAA
GAATTACCGG CCCTGAAACT GGAGCGCGCC CGTTTTATGG TCGAGGTGAC GGCGGATGCT
GATAATGCCA CCGCCGACGG CATCGATCTG GTCGAATTCC ACGTGCAGAC CAATCCAGGC
ACACGGCCCG GCCCGATCAT GAAAGTCGCC TCAGGTGGCG AGCTATCGCG GTTTTTGCTG
GCGTTGAAAG TGGCGCTGGC CGATCGCGGC TCCGCCCCAA CCCTTGTGTT CGACGAAATC
GACACCGGTG TCGGCGGCGC TGTCGCCGAT GCCATTGGCC AGCGGCTGAA ACGGCTGTCG
GAGCGTGTCC AGGTCCTGTC GGTGACCCAT GCCCCACAGG TGGCCGCCCG CGCCGCCACG
CATCTGCTGA TCTCCAAGGG ACCGGCCAGC GGCAACGCAG AAAAGATCGC CACCCAAGTG
GCGATGATCG GCCCCGACCA CCGCCGCGAG GAAATCGCCC GGATGCTGGC AGGCGCTTCG
GTGACGGATG AGGCAAGAGC GGCGGCGGCC AAGCTTCTGG CCGGGGACCA TTGA
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| Protein sequence | MLVQLSIRDI VLIERLDLDF SAGLSVLTGE TGAGKSILLD SLSLALGGRG DGSLVRHGED
KGQVTAVFDV AISHPARIML RENGIDDDGD LIFRRVQSAD GRTRAYVNDQ PISVQLMRQA
GQYLVEIHGQ HDDRALVDTA AHRLLLDAFA GLTEEAQALG DSYRRWREAE RAFKIHKAKV
EAAAREADYL RASVEELEGL SPQDGEEEDL AERRSRMQKS ERIAGDIAEA SEFLNGNASP
VPMIASLMRR LERKSGEAPG LLEDTVSLLG TALDTLSSAQ MEVESALRRT EFDPRELERV
EERLFALRAA GRKYSVAVAD LPALAEKMIT DLADLDAGEE KLGALEKAVA ETKAVYFASA
QSLSQKRQNA ASSLADAVME ELPALKLERA RFMVEVTADA DNATADGIDL VEFHVQTNPG
TRPGPIMKVA SGGELSRFLL ALKVALADRG SAPTLVFDEI DTGVGGAVAD AIGQRLKRLS
ERVQVLSVTH APQVAARAAT HLLISKGPAS GNAEKIATQV AMIGPDHRRE EIARMLAGAS
VTDEARAAAA KLLAGDH
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