| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2574 |
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| Symbol | |
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| ID | 7386589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2128554 |
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| End bp | 2129468 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643651668 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002549856 |
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| Protein GI | 222148899 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.127143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATCCG CTATCTGTAG CTATATCCCC ACCCTCCTCT GCCAGTTTCC GGCGGTCGAT
GACACTCTGA TGCGGAGTTT CAAGAAGACC GTCGATACCG GCTTCAAGAC GTTCGTCCGT
TCCTATGGCG ATTTCCTCGA CGGATTGACC TTGCCGCTGC AATGGTTCCT GAACTGGCTT
CAGGCGCTGT TCGTTGATAC GCCCTGGATC GTGATGATCT TCGCACTGGC CGCCATTGTC
TACGGCGTCA GCCGCAATTG GCGCATCACG CTCGGCACGG CTCTTGCCAT GGTGTTGATC
GGCATGGCCG GTCTCTGGCA GGATACCATG ATAACGCTTG CCATGGTGAC CGTTTGCACG
CTGTGCGCCG TCGTCATCGG CATTCCCCTC GGCATCTGGA TGGCGCGGTC CGACCGCGCG
CAGTCGACCT TAAACCCGGT GCTCGACGTG ATGCAGACCA TGCCGAGCTT CGTCTATCTG
ATCCCTGTTG TGATGATTTT CGGGATCGGC AAGGTGCCGG GCCTGATCGC GGTGGTGATC
TATGCCATCG CGCCGATTAT CCGGCTCACC AATCTCGGTA TCCGCCTTGT CAGCCGCGAG
GCCATCGAAG CAGCAGATGC TTTCGGGTCG TCGGAGCGGC AGAAACTGTT CAATGTCCAG
ATCCCGCTGG CGCTGCCCAA CATCATGGCG GGCATCAACC AAACGATCAT GATGTCGCTG
GCCATGGTGG TCATCGCCTC AATGATCGGT GTTGGCGGGC TCGGCAAGAA TGTCCTGCAG
GCCATCACCA ACCAGTTCTT CACCATCGGG CTGCTCAACG GCTTTGCCCT TGTGGCGATC
GCCATCATTT TCGACAGGGC AAGCCAAGCC TATGGCAAAC GCCTCCAGAA ACATACACAG
GTGCTGCATG GCTAG
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| Protein sequence | MASAICSYIP TLLCQFPAVD DTLMRSFKKT VDTGFKTFVR SYGDFLDGLT LPLQWFLNWL
QALFVDTPWI VMIFALAAIV YGVSRNWRIT LGTALAMVLI GMAGLWQDTM ITLAMVTVCT
LCAVVIGIPL GIWMARSDRA QSTLNPVLDV MQTMPSFVYL IPVVMIFGIG KVPGLIAVVI
YAIAPIIRLT NLGIRLVSRE AIEAADAFGS SERQKLFNVQ IPLALPNIMA GINQTIMMSL
AMVVIASMIG VGGLGKNVLQ AITNQFFTIG LLNGFALVAI AIIFDRASQA YGKRLQKHTQ
VLHG
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