| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2350 |
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| Symbol | |
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| ID | 7386410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1921744 |
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| End bp | 1922322 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651492 |
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| Product | phage related lysozyme protein |
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| Protein accession | YP_002549681 |
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| Protein GI | 222148724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.109482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGATCA ATAAAATCAA ACCGACGAAG AGGGCATCAA TTGTGATTGC TGGTATCGTC
GCCATTGCGA CCGGTGGCGT TGTTTCCGTC TTCGGTGGCT ATTCTGTCCC CGACGACGTT
GCCCTTGCCG TCAAGATCAT CCAGCCTTGG GAAGGTCGGT CGCTTAAGGC CTATTACGAC
ACGATAGCGC GCCCTCCGGT CTGGACCATT TGCGACGGTG ATACCGATAA AGTCAGCCCT
GGAATGGTTG AGACCCAAGA AGGCTGCAAC AAGCGGCTTG TCGTGAAGCT GGTCAAGGAT
TACCGGGCTC CGGTTGCTAA ATGCGTGGGA GACTGGGACA GGAAGCCGCT TTCCTGGCGG
GCCACCATGC TGACATTGTC GTGGAATGTC GGTGTTGGAG CAACGTGCAA TTCGACTGCC
GTTCGTCTCG CGAAGGTGGG TAAATTCCGG GAAAGCTGCG AAGCGGCCAC TGCGTTCAAT
CGCGCCGGTG GCAAGGTGAT CACCGGTCTC GTTAACCGCA GGGAAATGGG TGACGCCAAT
CGGATAGGCG AAGCCGAACT TTGTGTAAGT GGTCTGTGA
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| Protein sequence | MPINKIKPTK RASIVIAGIV AIATGGVVSV FGGYSVPDDV ALAVKIIQPW EGRSLKAYYD
TIARPPVWTI CDGDTDKVSP GMVETQEGCN KRLVVKLVKD YRAPVAKCVG DWDRKPLSWR
ATMLTLSWNV GVGATCNSTA VRLAKVGKFR ESCEAATAFN RAGGKVITGL VNRREMGDAN
RIGEAELCVS GL
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