| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1895 |
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| Symbol | |
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| ID | 7387207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1571016 |
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| End bp | 1572383 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643651169 |
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| Product | ABC transporter substrate binding protein |
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| Protein accession | YP_002549366 |
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| Protein GI | 222148409 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA AAGCAAATTA CACCATCGTC GGCTTGTTCA CGCTTCTTGT GATCCTTGCG
GCATTTGGTT TTGTCTACTG GATGGCCGAA TATGGCCGTG GTGGTCCAAT GTCACCACTG
ACCATCCGCA TCCCTGGCTC CGCCAATGGT CTGAGCGTCG GCTCTCCGGT GCGTTTCAAC
GGCATCCAGA TCGGCTCGGT CGTTTCCTTG AGCATCGACC GTGATGATCC GGCCTTTTCC
ATCGCTGAGA CACAGGTGCA GCAGGATGCG CCTATTCGCT CCAATACCAA GGCGGCGCTT
GAGGTTCAGG GCCTGACCGG TGCTGCCTAT GTCGAAATGT CGGGGGGCGT TGGTGGCGAC
GATTTGCTGA AGAAAGCCCA GGAGACCGGC AAGACAGCGG TCCTGGTGGC CGATCAGTCC
AGCCTGACCA ATCTTCTGGC GACGGCTGAC AAGATCATGA AGCGCGCCGA TGATGCTATT
GCCAATGTTC AGGGCTTCGT CGCCGATGCG CGCGGGCCGT TGACGAATAC GATGCGCAAT
GCTGAAACTT TTTCCAAGGC TCTGGCTGAC AATGCCGATG GTATCGACAC CTTCCTGAAG
AGCGTCAGCG CGCTTTCCGA TACGATTACA GGTCTCTCCG GGCGGCTTGA TTCGACACTT
GCCGCAGCCG AAGACCTGCT GAAGGCAGTG GACCGCAACA AGGTCAACCA GATCCTGACC
AATGCCGAAA CCTTTACCGG CAAGATTGCC GATGCCTCCG ACAAAGTCGG CGTCGCCGTC
GACAATTTTT CGGCGACGGC AAAGACCTTC AACGATTTCG GTGTGAAGGC TGAAGGAACG
CTAGGACAGG TCAACGCGCT GATTGCCGCG ATCGATACGC AGAAGGTCTC GCGCGTCGTG
GATGATGTTT CGGTGGCCGT TACCGACGCC CGCAGTGCTG CTGCCAATGT CCAATCGGTG
ACCGAGACCT TCAAGGATCG TAAACCGGAT ATCGACCAGG CCATCAGCGA CTTTACCCAG
CTTTCCAACC GGTTGAACAA CGCCTCGACC AGGGTTGATG GTATTCTGGC CAAGGTCGAC
GCGCTGCTGG GCTCCGACGA CACCAATTCT CTTTCGGCTG AGGCCAAGCG CACGCTTCAG
TCCATTCGCG CCGTGGCTGA CAATCTCAAC CAGAAGATCG GCCCGATTGC CGACAACCTG
TCGAAATTCT CGTCTTCGGG CCTGAAGGAC ATTCAGACGC TGGTCAACGA TACGCGCAGC
ACCGTGAAGA ACCTGGATGA CACGATCAGC AATTTTGACC GCGATCCGCA ACGGCTGATC
TTCGGTGGCG ACAACGTCAA GCAATATGAT GGGCGGACAA GACGGTGA
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| Protein sequence | METKANYTIV GLFTLLVILA AFGFVYWMAE YGRGGPMSPL TIRIPGSANG LSVGSPVRFN
GIQIGSVVSL SIDRDDPAFS IAETQVQQDA PIRSNTKAAL EVQGLTGAAY VEMSGGVGGD
DLLKKAQETG KTAVLVADQS SLTNLLATAD KIMKRADDAI ANVQGFVADA RGPLTNTMRN
AETFSKALAD NADGIDTFLK SVSALSDTIT GLSGRLDSTL AAAEDLLKAV DRNKVNQILT
NAETFTGKIA DASDKVGVAV DNFSATAKTF NDFGVKAEGT LGQVNALIAA IDTQKVSRVV
DDVSVAVTDA RSAAANVQSV TETFKDRKPD IDQAISDFTQ LSNRLNNAST RVDGILAKVD
ALLGSDDTNS LSAEAKRTLQ SIRAVADNLN QKIGPIADNL SKFSSSGLKD IQTLVNDTRS
TVKNLDDTIS NFDRDPQRLI FGGDNVKQYD GRTRR
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