Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_1790 |
Symbol | |
ID | 7386771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 1492707 |
End bp | 1493531 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643651091 |
Product | outer membrane protein |
Protein accession | YP_002549292 |
Protein GI | 222148335 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCCGA AAACGCAGGC CAAAAATGAT GGCCGAAGAC AATGGCCAGA GACGAGGATT GACATGAAGA TACGATTTTT TCGCACTGCC GTTTTGGCAA CGCTCATTGC CTCGACCGGC CTCGGCGCGC CAGCCTACGC GCTGGATGAC AAGCAGAAGC AAGAAATCGG CGCCTTCATC AAGGAATATC TGATCGCCCA TCCGGAAATC ATGCTCGACG TGCAGGACGC CTTGCAAAAG AAGCAGGAAG CGGCCCGCGC CAGCCAGGCC TCCAGCGGCA TTGAACTCAA CAAGGCTGAG ATCTTCAATT CGAAGGATGA TATCGTCCTT GGCAATCCGA AGGGTGACGT GACCATCGTT GAGTTCTTCG ACTATAATTG CGGCTATTGC CGCCATGCGC TGGCCGACAT GGATACCATC CTGAAGACCG ATAAGAATGT GCGGTTCGTC CTGAAGGAAT TCCCGATTCT TGGGCCGGAT TCGGTCGCCG CGCACCGCGT TGCGGACGCA TTCCGCAAGC TGGCACCGGA AAAATACAGC GACTTCCACC ATGCCCTGCT TGGCAGTGAA GGTCGCGCCA CGCAGGAAAG CGCCATAGAT GCGGGTGTGA TGCTGGGGGT TTCGGAAGCA GCCCTTCGTA AGGAAATGAC TGACAGCCCC AATGACACGT CCGTCAAAAA GGTCTATCAA CTGGCCCAGG ACCTAGGCAT CAACGGCACA CCCGCCTATG TGATCGGCAA TGAACTAGTT TCCGGTGCCA TCGGCGCAGA TGCTCTCCAG GAGAAGCTGA CGAATGTTCG CACCTGCGGC AAATCAACCT GCTGA
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Protein sequence | MPPKTQAKND GRRQWPETRI DMKIRFFRTA VLATLIASTG LGAPAYALDD KQKQEIGAFI KEYLIAHPEI MLDVQDALQK KQEAARASQA SSGIELNKAE IFNSKDDIVL GNPKGDVTIV EFFDYNCGYC RHALADMDTI LKTDKNVRFV LKEFPILGPD SVAAHRVADA FRKLAPEKYS DFHHALLGSE GRATQESAID AGVMLGVSEA ALRKEMTDSP NDTSVKKVYQ LAQDLGINGT PAYVIGNELV SGAIGADALQ EKLTNVRTCG KSTC
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