| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1505 |
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| Symbol | |
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| ID | 7386469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1261827 |
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| End bp | 1262822 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650877 |
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| Product | dTDP-glucose 4-6-dehydratase |
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| Protein accession | YP_002549082 |
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| Protein GI | 222148125 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGA CACGGACGGC ATTGGTGACC GGCGGCGCTG GATTTCTCGG TTCCCACGTC
TGCGCACGAT TGCTTAACGA AGGCTGCGAT GTGGTCTGCC TGGACAATCT TCAGACCGGG
CGGCGCAAAA ATATCGAACC TCTGCTGGCC AATCCCAAAC TGTCCTTCAT TAAAGCCGAT
GTCCGCGATC CCTTGCCGCA AGGCGTCTAC GACGAGATCT GGAATCTCGC CTGCCCCGCC
TCGCCGCCGC AATATCAGAT CGATCCTGTT GGCACGATGC TGATCAATGT GCTTGGCATG
AAAAACGTGC TGGACCTGGC TGTCGCCTGC GGCGCACGGG TGTTTCAGGC GTCGACCAGC
GAGATCTACG GCGATCCGCA GGTTCATCCG CAGACGGAAA GCTACCGTGG CGCGGTCAAT
ACGATAGGGC CGCGGGCCTG CTATGACGAA GGCAAGCGCG CCGCCGAAAC CCTGTGTTTC
GATTATCACC GCCAGCATGG CGTTGAAATC AAGGTGGTGC GGATCTTCAA TACCTATGGT
CCAAACATGG ACCCGCAGGA CGGACGGGTG GTCTCCAACT TCATCGTTCG CGCCCTGGAA
GAGGCGCCGC TTGAGCTTTA TGGCGGCGGC ACGCAGACCC GGTCCTTCTG CTATGTCGAT
GACCTGATTG AGGGATTTTT CCGGCTGATG CGCTCTGATG CCTCGATCAC TGGTCCGGTC
AATATTGGCG ATCCCGGCGA ATTTACCGTG CGTGAACTGG CTGACATCAT TTTGGAAATG
ACCGGAAGCC GGTCGGTAAT CGTCGACAGG CCGTTGCCGA AGGACGATCC GCTGCTGCGG
CGCCCCGACA TCACCCTTGC CGGGCAATTG CTGGGCTGGG AGCCGAAAGT GCGGCTACGC
GAAGGACTGA AGCGGTCGAT CCCGTATTTC GCAGCGGAAA CGGGACGCAC CATTAACACC
AGTGCTGCCA ACATCAATCT GGATACCATG TCATGA
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| Protein sequence | MGKTRTALVT GGAGFLGSHV CARLLNEGCD VVCLDNLQTG RRKNIEPLLA NPKLSFIKAD
VRDPLPQGVY DEIWNLACPA SPPQYQIDPV GTMLINVLGM KNVLDLAVAC GARVFQASTS
EIYGDPQVHP QTESYRGAVN TIGPRACYDE GKRAAETLCF DYHRQHGVEI KVVRIFNTYG
PNMDPQDGRV VSNFIVRALE EAPLELYGGG TQTRSFCYVD DLIEGFFRLM RSDASITGPV
NIGDPGEFTV RELADIILEM TGSRSVIVDR PLPKDDPLLR RPDITLAGQL LGWEPKVRLR
EGLKRSIPYF AAETGRTINT SAANINLDTM S
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