Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_0867 |
Symbol | |
ID | 7387682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | + |
Start bp | 738431 |
End bp | 738742 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643650409 |
Product | hypothetical protein |
Protein accession | YP_002548618 |
Protein GI | 222147661 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01560] uncharacterized phage protein (possible DNA packaging) [TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0428066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTCA CCGTTGCGCA AATCAAAGAG CAATTGAACA TCGTCGCGGA AGATGGATCG GACGATGCAT TTCTAGGTCG CAAACTGGCG GCGGCCCAAG ACCATATTGA ACGCGGTCTC GGCTTCAAGA TTGAAGCAGC CTATGGCGGG GAGGGGCAAG ACCCTATCCC GCCTTCGCTC ATTGAGGCCG TCTGCCAGCT TGCCGCCCAT TGGTATGAGA ACCGCGAGGC GTCCGTGGTG GGCATGGGCG TCAACACCAT GCCCTTCAGT GTGCAGGACA TTATCCGCGA ATACCGCAAT TGGAGCTTCT GA
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Protein sequence | MIVTVAQIKE QLNIVAEDGS DDAFLGRKLA AAQDHIERGL GFKIEAAYGG EGQDPIPPSL IEAVCQLAAH WYENREASVV GMGVNTMPFS VQDIIREYRN WSF
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