Gene Avi_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0867 
Symbol 
ID7387682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand
Start bp738431 
End bp738742 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content56% 
IMG OID643650409 
Producthypothetical protein 
Protein accessionYP_002548618 
Protein GI222147661 
COG category 
COG ID 
TIGRFAM ID[TIGR01560] uncharacterized phage protein (possible DNA packaging)
[TIGR02215] phage conserved hypothetical protein, phiE125 gp8 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0428066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTCA CCGTTGCGCA AATCAAAGAG CAATTGAACA TCGTCGCGGA AGATGGATCG 
GACGATGCAT TTCTAGGTCG CAAACTGGCG GCGGCCCAAG ACCATATTGA ACGCGGTCTC
GGCTTCAAGA TTGAAGCAGC CTATGGCGGG GAGGGGCAAG ACCCTATCCC GCCTTCGCTC
ATTGAGGCCG TCTGCCAGCT TGCCGCCCAT TGGTATGAGA ACCGCGAGGC GTCCGTGGTG
GGCATGGGCG TCAACACCAT GCCCTTCAGT GTGCAGGACA TTATCCGCGA ATACCGCAAT
TGGAGCTTCT GA
 
Protein sequence
MIVTVAQIKE QLNIVAEDGS DDAFLGRKLA AAQDHIERGL GFKIEAAYGG EGQDPIPPSL 
IEAVCQLAAH WYENREASVV GMGVNTMPFS VQDIIREYRN WSF