Gene Avi_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0551 
Symbol 
ID7388957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand+ 
Start bp468621 
End bp469301 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID643650186 
Productcarboxylesterase protein 
Protein accessionYP_002548398 
Protein GI222147441 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.315382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAT CGCTCTTGCG GCCTGTAGCG CCTATTATCG TGGAAACAGG CCAAGTGCCG 
AACGCTACCA TTCTCTTTAT TCATGGCCTT GGAACGGACG GGAACACCTT CTTACCTGTC 
ATCCAACGCC TCAATCTCGG ACGTGTTGGG CCTGTCCGGT TTGTCTTGCC CAATGCGCCC 
AAGCAACCAG TCTCGATCTG CCAAGGGCAA ACCATGTCGG CCTGGTTTGA CCTTCTTGAT 
CAGGATTTTG TCGCACGCGA GGACGAAGCC GGTTTGCGGA CCGCAGCCGA GTATTTTAAA 
GCGCTGATCG AAGCAGAAAT CAAAAGCGGT ATTGCCCCGG AACGGATTGT GATTGCAGGC 
TTTTCTCAAG GCGGTGCTCT CTCCTTGCTG ACAGGACTGC GCTTCAGACA TCGGCTGGCG 
GGTATCGCCG CCCTATCTGG TTGGCTACCT CTTAGCGCAA GCCTTGGTGA CGAACATTCG 
CAGGCATCGC TCGCAACGCC CGTCTTTTTG GGGCATGGGG CGATCGACAA GGTCACACCT 
TTGCGACAAA TCAAAACAGC TCAAACCCGA ATGGAGGCCT TAGGATATAC AATCACGTCT 
CATACTTATC CTATCGGCCA CACCATTACA GAAGCCGAAT TGCATGACCT GAGTGTCTGG 
CTGGAGCATT GCCTCGGCTA A
 
Protein sequence
MTASLLRPVA PIIVETGQVP NATILFIHGL GTDGNTFLPV IQRLNLGRVG PVRFVLPNAP 
KQPVSICQGQ TMSAWFDLLD QDFVAREDEA GLRTAAEYFK ALIEAEIKSG IAPERIVIAG 
FSQGGALSLL TGLRFRHRLA GIAALSGWLP LSASLGDEHS QASLATPVFL GHGAIDKVTP 
LRQIKTAQTR MEALGYTITS HTYPIGHTIT EAELHDLSVW LEHCLG