| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_0471 |
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| Symbol | |
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| ID | 7388474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 399907 |
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| End bp | 400785 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643650119 |
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| Product | hypothetical protein |
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| Protein accession | YP_002548333 |
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| Protein GI | 222147376 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.359118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGA TGCGCAATGG AAAACGGCGA AAGACGGATG GCAGCTGGGC GCCGCTGAAG
GACAACCAGA CGGATCGGCG AAATGCCAGG ATCGTTCCCC AGACGCCGCA AACGCTGTCG
CCGTCCTATC GCCTCGCCTA TGCCGATGAC GATTTTTTGT GCCGGGAAGA ATTGCGCCCG
GTGCGCCTGC AACTGGAATT GCTGAAAACC GAAATGGTGC TTTCCGAACG GGGTATCAAA
TCCACCGTGG TGATGTTTGG CGGCGCGCGC ATTCCGGCAC CCGGCCAATC CGCCTGGGCG
GCGCGCAACG ACATACAGCG GCGCAATCTC GAAGCCGCAT CGGTATTTTA TGACGAGGCC
CGCGCATTTG CCCGGCAATG CAGCCAATAC GCGGCACGGT TCGACTATCA GGAATATGTG
ATCGTCACCG GCGGCGGGCC AGGCGTGATG GAAGCCGGAA ATCGCGGCGC CGCCGACGTC
GGTGCGCCAT CGATCGGCTT GAATATCGTG CTGCCGCATG AACAGGCGCC CAATGCGTTC
GTGACGCCGG ACCTGTCCTT CAACTTCCAC TATTTTGCCA TCCGCAAGAT GCATTTCCTG
ATGCGGGCCA AGGCAATCGT CGTCTTTCCC GGCGGTTTCG GCACGCTGGA CGAGATGTTC
GAGGCGGTGA CGCTGATCCA GACCAAGCGT ATGGCACCGA TTCCGCTCAT CCTGTTCGGT
CGGGAATTCT GGCACAGGAT CATTGATTTC GACAGCCTGG CGGAGTTTGG AACCATTGCA
CCCGACGATG TCAAGCTGTT GAGCTTTGTC GAAACCGCTG ACGAGGCCTG GGATATCATC
GCCCGGCGGT ATGAAATAGA AACGGCTGAA ACCGCGTGA
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| Protein sequence | MAKMRNGKRR KTDGSWAPLK DNQTDRRNAR IVPQTPQTLS PSYRLAYADD DFLCREELRP
VRLQLELLKT EMVLSERGIK STVVMFGGAR IPAPGQSAWA ARNDIQRRNL EAASVFYDEA
RAFARQCSQY AARFDYQEYV IVTGGGPGVM EAGNRGAADV GAPSIGLNIV LPHEQAPNAF
VTPDLSFNFH YFAIRKMHFL MRAKAIVVFP GGFGTLDEMF EAVTLIQTKR MAPIPLILFG
REFWHRIIDF DSLAEFGTIA PDDVKLLSFV ETADEAWDII ARRYEIETAE TA
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