Gene Avi_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_0349 
Symbol 
ID7387797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp300626 
End bp301219 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content60% 
IMG OID643650023 
Productmethyltransferase 
Protein accessionYP_002548238 
Protein GI222147281 
COG category[I] Lipid transport and metabolism 
COG ID[COG3963] Phospholipid N-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.470435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA ACCTGAAGCA GCGGCTGGAA AAGAAGTTCG ATGAGGAAAT CCGTTTCTTC 
AAGGGCATGA TGCAAGGGCC GAAGCTGGTG GGCGCCATCG TGCCGACCTC CACCATTACC 
GCCCGGCGCA TGGCCAGCAT CATCACGCCG GAAAGCGGAC TGCCAGTGCT GGAACTGGGA 
CCGGGAACGG GCGTGATCAC CAAGGCGATC CTGGCGCGCG GCATCAAGCC AGAGAAACTG 
GTTTCGGTCG AATATTCCGC CGACTTCCAC CGGCACCTGA CGGAGACGAT CCCGGGCGTG 
AATTTCGTCC ATGGTGACGC CTTCAACCTG GAAAAGACGC TGGGCCCGCT GTCCGGCCTG 
TCGTTCGACT GCGTGATTTC CGCCATGCCG CTTTTGAACT TCCCGATGCA GGAACGCATC 
CGGCTGCTAG AGGACCTTTT GGACCGTATG CCGCATGGAC GGCCCTTCAT GCAGATTTCC 
TACGGGCCGA TGTCGCCGAT CATTGCCAAG GGCGGCAGCT ATTTCATCCA GCATTTCGAT 
TTCGTGGTCC GCAACATTCC GCCAGCCCAG CTCTGGATCT ATCGCCGCCG CTGA
 
Protein sequence
MKLNLKQRLE KKFDEEIRFF KGMMQGPKLV GAIVPTSTIT ARRMASIITP ESGLPVLELG 
PGTGVITKAI LARGIKPEKL VSVEYSADFH RHLTETIPGV NFVHGDAFNL EKTLGPLSGL 
SFDCVISAMP LLNFPMQERI RLLEDLLDRM PHGRPFMQIS YGPMSPIIAK GGSYFIQHFD 
FVVRNIPPAQ LWIYRRR