| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_C0239 |
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| Symbol | |
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| ID | 3678038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007412 |
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| Strand | + |
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| Start bp | 293464 |
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| End bp | 294546 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637715319 |
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| Product | Phage integrase |
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| Protein accession | YP_320513 |
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| Protein GI | 75812896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000242525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00437263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAATT TACCCGTCAA AAGCGTGGAA TCACTTGCTG TGGAGGTTGT GACTCTACCA
CTTGATGAAG CTCGTGTCGC GCTTGTGGAT TATTATTTCC CCAACCGCCA GAAAATTAAT
TCCACACAAC AGCTAATTGA GCTATGGGTG CATTCTGTCA CTATCAAAAG CGACCAAACG
CGACGGGCAT ATCGGCAAAT TGGTTATGAG CTTGTCGATT ATATGCAGTC GCGGTTTGGG
ATATCTGATT TGAGGATGGT AACGTTATTC CATCTACACG CTTATCTGGC TTGGCTCAAA
GATGAAAAGC CAGTACGCGG AAAGAAAAAT ACTTATGGAA TTAGTAAAAA TACTGCGGCT
AAATACACGG CGGCGATTAA AAGTTTGTGG GAATGGGGTA CTAGAGCTTC TATTGGTTAT
TTTGCTATCG ACTTGGGCAA GGACTTAAGC ATCCAGTGGG ACGATAAGCT CGCAGAGCGC
ATTTTGTCGG AACGCGAGAT TGCTAAGTTG GAAAAAGCGG CGATGGCAGT AGACTTGCAA
CACAACACTA ATAAGATGCA CTGGTTGCTG TTTACTCTCA TGTTTTACAG TGGGGTGAGG
GCAGGAGAAA TTGCGCGGCA AACTTCTGAT TATGGTAAGC GCGTAATTAC GCCGGGGTTA
TTTTGGCGGC AGTTTCGGGA GGATGGGGAC TGTCTGTTGT TAACTGTGAC GGGGAAACGA
AATAAAACTA GAACCATTAG TCTCGATCCG GAAACTAGTG CAGTGTTACT GGATTATCGT
GGGGATGCCA GCAATGATCG GCCGGTGTTT CCTAGTCCCA GTCGGCGGGA TAGGGGTAAA
CCTTTAAGCG ATCGCGGGTT GCGACTGATG ATGGAGGAAA TTTCTACTTG TGCGGGAATT
AAGTTCAGCG CCCACTTTCT CCGCCACACT CACGCAACAC TGGCTAAAAA AAATGGAGCT
TCTGATTTTG ACTTACAAGC AGATTTGGGC CACGCTTCCC CAGCGACAAC TGCAAAGTAC
ATTCACCATG TTGGGCGTGT TGGGACTTCT CACGCACTGC GTAAAAAAAG CAAACATCGG
TAA
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| Protein sequence | MENLPVKSVE SLAVEVVTLP LDEARVALVD YYFPNRQKIN STQQLIELWV HSVTIKSDQT
RRAYRQIGYE LVDYMQSRFG ISDLRMVTLF HLHAYLAWLK DEKPVRGKKN TYGISKNTAA
KYTAAIKSLW EWGTRASIGY FAIDLGKDLS IQWDDKLAER ILSEREIAKL EKAAMAVDLQ
HNTNKMHWLL FTLMFYSGVR AGEIARQTSD YGKRVITPGL FWRQFREDGD CLLLTVTGKR
NKTRTISLDP ETSAVLLDYR GDASNDRPVF PSPSRRDRGK PLSDRGLRLM MEEISTCAGI
KFSAHFLRHT HATLAKKNGA SDFDLQADLG HASPATTAKY IHHVGRVGTS HALRKKSKHR
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