Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0220 |
Symbol | |
ID | 3678140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 255206 |
End bp | 255820 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637715300 |
Product | hypothetical protein |
Protein accession | YP_320494 |
Protein GI | 75812877 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0149567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00492185 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCGTC CACCATTACT AGACCCAAAT CGCTCATATA CTTTTAGCAA TTACTTTGAA TTAGGGTTTG CAGTTGATGA TTTAGTAGCT GAATTTGGTT ATTCATTCGA GCGTAAATTT CTGGAATTAC CACAATATTC AGGCTCATTA GATAGACTTA CTGAACTAAA ACAACGAATT GAAGAAGTAT TACCTTTTGT AGATTTAGAA AACGAAGCTA CTCGCAGGGA AATTTTAATT GCACCGATTG TTACAGATTT AATTCATTAT TCCCACGCTA AATTACGAAT AGAATACAAT ATTAAAGTTG ATAATAAACT CCAAGGTAAT TTGGACTATT ATCTACGAAC AACAACAAAT TTAATTGTGA TTGAAGCCAA GCAAGCAGAT ATAAATAGGG GATTTATACA ACTAGCCACT GAGATGATAG CTCTCGATAA ATGGACTGAT TCTACACAAG CTGAAATATT AGGAGCAGTA ACTACAGGTA ATGTTTGGCA ATTTGGTAGA TTAAATAGAC AAAAACAAAG TATTGAACAA GCAATTAACC TTTATCGAGT GACTGAAGAA TTGGAAGTTG TGGTCAGAAC GTTGCTGGCT GCACTGATGA ATTAA
|
Protein sequence | MSRPPLLDPN RSYTFSNYFE LGFAVDDLVA EFGYSFERKF LELPQYSGSL DRLTELKQRI EEVLPFVDLE NEATRREILI APIVTDLIHY SHAKLRIEYN IKVDNKLQGN LDYYLRTTTN LIVIEAKQAD INRGFIQLAT EMIALDKWTD STQAEILGAV TTGNVWQFGR LNRQKQSIEQ AINLYRVTEE LEVVVRTLLA ALMN
|
| |