Gene Ava_C0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0220 
Symbol 
ID3678140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp255206 
End bp255820 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content34% 
IMG OID637715300 
Producthypothetical protein 
Protein accessionYP_320494 
Protein GI75812877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0149567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00492185 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCGTC CACCATTACT AGACCCAAAT CGCTCATATA CTTTTAGCAA TTACTTTGAA 
TTAGGGTTTG CAGTTGATGA TTTAGTAGCT GAATTTGGTT ATTCATTCGA GCGTAAATTT
CTGGAATTAC CACAATATTC AGGCTCATTA GATAGACTTA CTGAACTAAA ACAACGAATT
GAAGAAGTAT TACCTTTTGT AGATTTAGAA AACGAAGCTA CTCGCAGGGA AATTTTAATT
GCACCGATTG TTACAGATTT AATTCATTAT TCCCACGCTA AATTACGAAT AGAATACAAT
ATTAAAGTTG ATAATAAACT CCAAGGTAAT TTGGACTATT ATCTACGAAC AACAACAAAT
TTAATTGTGA TTGAAGCCAA GCAAGCAGAT ATAAATAGGG GATTTATACA ACTAGCCACT
GAGATGATAG CTCTCGATAA ATGGACTGAT TCTACACAAG CTGAAATATT AGGAGCAGTA
ACTACAGGTA ATGTTTGGCA ATTTGGTAGA TTAAATAGAC AAAAACAAAG TATTGAACAA
GCAATTAACC TTTATCGAGT GACTGAAGAA TTGGAAGTTG TGGTCAGAAC GTTGCTGGCT
GCACTGATGA ATTAA
 
Protein sequence
MSRPPLLDPN RSYTFSNYFE LGFAVDDLVA EFGYSFERKF LELPQYSGSL DRLTELKQRI 
EEVLPFVDLE NEATRREILI APIVTDLIHY SHAKLRIEYN IKVDNKLQGN LDYYLRTTTN
LIVIEAKQAD INRGFIQLAT EMIALDKWTD STQAEILGAV TTGNVWQFGR LNRQKQSIEQ
AINLYRVTEE LEVVVRTLLA ALMN