Gene Ava_C0209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_C0209 
Symbol 
ID3678129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007412 
Strand
Start bp247464 
End bp248288 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content37% 
IMG OID637715289 
Producthypothetical protein 
Protein accessionYP_320483 
Protein GI75812866 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4678] Muramidase (phage lambda lysozyme) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0202291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG TACCGATTTT TATATCAGGT GTGGTTGGTG CAGCCTGCTC TGTTGCATTT 
TCTTATGGAG TAGCTTCACT GCCATGTGGA TTGGTATCCA AGGGTGCGGA TAGTGTTTGC
CAAGTGCGTA GTTTCGGTAA GGCAGTTGAT AGTTGGAAAT TTGGGTTTAT TGTTGGTGGT
TTAGTAGGAT GGATTTTCAG TCCTCGTCAT CAATTTATAT CCCGTTTTCA ACCCATTCAT
TTGTCAACTG CTTCCTTAAT TACTTTAGGC ATTTATTTCT CAATTTCTCA AGGTAATAGT
GTTTCTTCAT TGTCGTCAAA TAGTTTAAAA GGAAGAGTTA GTGCAAGAGA TTACTCACCA
CATCATTATT CACCACGGTT GAGTGCTTTT TTAGCAACAA TTCGTTGGGC AGAAACAGGA
ACCAGTGAGC CAGAAAGTTA TCGCAAGTTA GTATTTAACG GAACTTTTAA TAATTTTTCT
ACACACCCGT TAAAGAAACA GTGCGCTCCT ATTAATGGTA AAAATGTTTG TTCGACTGCG
GCTGGTGCTT ATCAAATGTT AGATATAAGT TGGTATGACC TTCAACCAAA GTTAAACTTA
AAAGATTTTA GTCCAGCTTC TCAGGACAAA ATGGCAATTG AATATATTCG TCGTAATAAT
GCTTTAAATG ACATTGAAGC AGGAAGATTT GATACTGCTG TATGCAAAGT AGGTAAAATT
TGGGCCAGTC TTATTTGCAA CTCGTACAAT CAAAACCCAA AATCTTTAGA AGAGTTACGT
AATTATTATC AAAAAATGTT GGTAGTTTAT GGAGGTCAAA AATAG
 
Protein sequence
MQIVPIFISG VVGAACSVAF SYGVASLPCG LVSKGADSVC QVRSFGKAVD SWKFGFIVGG 
LVGWIFSPRH QFISRFQPIH LSTASLITLG IYFSISQGNS VSSLSSNSLK GRVSARDYSP
HHYSPRLSAF LATIRWAETG TSEPESYRKL VFNGTFNNFS THPLKKQCAP INGKNVCSTA
AGAYQMLDIS WYDLQPKLNL KDFSPASQDK MAIEYIRRNN ALNDIEAGRF DTAVCKVGKI
WASLICNSYN QNPKSLEELR NYYQKMLVVY GGQK