Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_C0209 |
Symbol | |
ID | 3678129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007412 |
Strand | - |
Start bp | 247464 |
End bp | 248288 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637715289 |
Product | hypothetical protein |
Protein accession | YP_320483 |
Protein GI | 75812866 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4678] Muramidase (phage lambda lysozyme) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0202291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0118376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTG TACCGATTTT TATATCAGGT GTGGTTGGTG CAGCCTGCTC TGTTGCATTT TCTTATGGAG TAGCTTCACT GCCATGTGGA TTGGTATCCA AGGGTGCGGA TAGTGTTTGC CAAGTGCGTA GTTTCGGTAA GGCAGTTGAT AGTTGGAAAT TTGGGTTTAT TGTTGGTGGT TTAGTAGGAT GGATTTTCAG TCCTCGTCAT CAATTTATAT CCCGTTTTCA ACCCATTCAT TTGTCAACTG CTTCCTTAAT TACTTTAGGC ATTTATTTCT CAATTTCTCA AGGTAATAGT GTTTCTTCAT TGTCGTCAAA TAGTTTAAAA GGAAGAGTTA GTGCAAGAGA TTACTCACCA CATCATTATT CACCACGGTT GAGTGCTTTT TTAGCAACAA TTCGTTGGGC AGAAACAGGA ACCAGTGAGC CAGAAAGTTA TCGCAAGTTA GTATTTAACG GAACTTTTAA TAATTTTTCT ACACACCCGT TAAAGAAACA GTGCGCTCCT ATTAATGGTA AAAATGTTTG TTCGACTGCG GCTGGTGCTT ATCAAATGTT AGATATAAGT TGGTATGACC TTCAACCAAA GTTAAACTTA AAAGATTTTA GTCCAGCTTC TCAGGACAAA ATGGCAATTG AATATATTCG TCGTAATAAT GCTTTAAATG ACATTGAAGC AGGAAGATTT GATACTGCTG TATGCAAAGT AGGTAAAATT TGGGCCAGTC TTATTTGCAA CTCGTACAAT CAAAACCCAA AATCTTTAGA AGAGTTACGT AATTATTATC AAAAAATGTT GGTAGTTTAT GGAGGTCAAA AATAG
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Protein sequence | MQIVPIFISG VVGAACSVAF SYGVASLPCG LVSKGADSVC QVRSFGKAVD SWKFGFIVGG LVGWIFSPRH QFISRFQPIH LSTASLITLG IYFSISQGNS VSSLSSNSLK GRVSARDYSP HHYSPRLSAF LATIRWAETG TSEPESYRKL VFNGTFNNFS THPLKKQCAP INGKNVCSTA AGAYQMLDIS WYDLQPKLNL KDFSPASQDK MAIEYIRRNN ALNDIEAGRF DTAVCKVGKI WASLICNSYN QNPKSLEELR NYYQKMLVVY GGQK
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