Gene Ava_5065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5065 
Symbol 
ID3683210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6361581 
End bp6362288 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content46% 
IMG OID637720426 
Producthypothetical protein 
Protein accessionYP_325557 
Protein GI75911261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0222136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.603351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT CTGCATCCTC ATCATCAGAT GCTGTCCCGC GACCGCCGCG CCACAATTGC 
ACACATCCCA TAAAAGTATT TTATAGTGTT ACCTACGCCC TACCCGGACA AGTAGCATTT
TGTATTCCGC GAATTAGTGA AGATCCAAAC TACTTGCAAC ATCTACAAAG GTTGCTAGCA
AAGGAAACAG GGATTACCAC GGAGGAAGTT AATCTCGCTA CAGGGTCTTT AGTAATTGCT
TACCAGTCTG GACTAATGTC TGATGTGGAA ATGCGTGAGC ATCTAGCTAA TATACTCCAG
TCTGCTGATA TGACGGATGA TACAGAATTA ACCCCTGGAT CACCAACGGC AGAACCAGTA
ACTTCATCCT CTCCCCCTCA GTCTGTCACT CATTCACAAC CAACTGAGCA ACAGATAAAA
GTAGCTCATA GCGTCGTTCA TGCGATCCCT GGACGAGTGC GGTTTCATGT CCCGCAAGTC
GCTACAGATC CAGCCTACGT CCAACGTTTA GAAGCTTTAC TCCAATCAGA CCCAGTAGTG
ATCAGTGAGC GAATTAATCG GGAGGCTGCT TCTGTGGTGA TTATTTACAA ACCAGGAAAA
GTACAAAGGC CAAAACAGCA ATTGCAAAGT ATTTTCGCAG TCGCAATTGC ACACTTTTCC
AGTCTGATTC AATCTGCGGC AACTGCCAAG ATATCCAGTC GTGTATAA
 
Protein sequence
MDDSASSSSD AVPRPPRHNC THPIKVFYSV TYALPGQVAF CIPRISEDPN YLQHLQRLLA 
KETGITTEEV NLATGSLVIA YQSGLMSDVE MREHLANILQ SADMTDDTEL TPGSPTAEPV
TSSSPPQSVT HSQPTEQQIK VAHSVVHAIP GRVRFHVPQV ATDPAYVQRL EALLQSDPVV
ISERINREAA SVVIIYKPGK VQRPKQQLQS IFAVAIAHFS SLIQSAATAK ISSRV