Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4948 |
Symbol | |
ID | 3679135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6221943 |
End bp | 6225779 |
Gene Length | 3837 bp |
Protein Length | 1278 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637720306 |
Product | hypothetical protein |
Protein accession | YP_325440 |
Protein GI | 75911144 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.575028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCTG TAACTATTTT CAATTTACGA TTGATGGGCG CAATGGCTGG GGCTTTCAGC TTTGTCTTAT ATCCAGCAAT AGTTCATGCA GAGGTTCCAG AAAATCCAGA ATTTTCACCT GATTTAGAAA ACCCCTCTCC TGACCTCTCT ATCAAGAGAG AGGCTTTGAA TATTCCCCTT TTCCCACTAG AGAAAGAGAT TAGGGGATTA GGTCGCACAA CTGAATTAAC CACTCAGTTA ACCCAGGATG AAATAGAAAA CCCCTCTCCC GCCCCAGAGG CTTTGAATAT TTCCACTTCC CCTGTAGAGA AAGGGGTTAG GGGATTAGGT CGCACAACTC AGACCAATGA AGTACAAGAG GAAACACCTA CATCCAACGC ACCAACAAAT GCTATCTCAC CATTCCAACC AGCAGATGAC CCATTACCCA GAGGTTTAAG TAGGCTTGCA GAACCAGCGC CAACTACCCC AAAGGAAATT CCCACCTTTC AACCAGCAAC AGATACACCC ATACCTAGAA GTTTACGCAA ATTAGTTGCA GAAACAGATA AGGGTAATGG ACGGAGGGAA AATACTCCAA CAACTGCAAC AGGAGTGAAA ATCTTGACTC CCAGTCCTGA CGGTGTGATT GATGTGCCAG CAACTACCGT AGCAGTGCAA TTCCCATCTG GTAGTCAAGT AGAGTTGCGG GTAAATGGGG TACTAGTAGA CTCTTCTTTG TTGGGACGTA CAGAAACTGA TGCTGATACT AACTTAGTAA CGCAGACATG GTATGGCGTT GGTCTCAAGG AAGGGGAAAA TACTCTAGCT GCACAAATAG TAGGAGGGAC AGAAGCACCT GTAACCCTAC GGGTAGTTGT TAGGGGAACA GCCAAAAAAC TCACAGTAGA AACCGTTGAA TCTCGTGTCC CGGCTGATGG ACGTTCAACG GCGACAATTC GCGGTCAACT CCTCGATGAA AATGGCAATC GCTCAAATCA AGATGCCATT ATTACCTTAA TTCCCACGGT GGGAGAGTTG GTAGGAACTG ACTTGAAACC AGAACAACCA GGGTTTCAGG TAGAGGCGAA AAAGGGAGAA TTTACTGCGG TATGGCGATC GCCTCTCCAA GCCCAAACAG GCAGGATTCG GGCTGTAGCT AACGATTTAG AAGCCTTCAC CCAACTGGAG TTTGCCACAG CACTACGCCC TAGTTTGGTG ACTGGGGTGA TAGATGTGCG GTTGGGAGCA AGAGGAACAA ATTATTACAG CAGGTTCCGT GATTTCCTCC CCTCTGATAG AAATAATGGT ACCCAATTAG AGTTTAACTC AGCCATATTT GCCACGGGTG CGATCGGTGA GTGGTTGTTT ACTGGTGCAT ACAATAGTTC TCGTAGCCTC AACGAAGATT GTAACTGTGA CAATCGTCTG TTTAGGTCAT ACCAATTTAG CGAACAAAAC TATCCTGTTT ACGGCGATAG TTCTAAAGTA GACGTAGTTA CACCCTCCAT TGACAGTGTA TATCTGCGTT TTGAACGTTC TACAGGTATT CCAGGTACTG CGCCTGATTA TGCTATGTGG GGCGACTACA ACACAGAGGA ATTTGCTCGG TCTTCTCAGC AATTCACTGC CGTTACCCGC CAACTCCACG GCTTTAAAGC CAACTACAAC TTAGGTAATC TGCAAATTAC AGGTTTCTAT GGCAATAACT TAGAAGCCTT TCAAAGAGAC ACCATTGCAC CTGATGGAAC CAGTGGTTAT TACTTCCTTT CCCGGCGGTT AGTTGTTCCT GGTAGTGAAA ACCTTTTTAT TGAATTAGAA GAACTCAACC GTCCTGGTAC AGTGCTGGAA CGTAAACAAT TAAGTCGCGG CCCAGATTAC GAAATAGACT ACGATCGCGG TACTGTAATT TTCCGTGAAC CAGTCTTACG TACTGATATT GATGCAACGG GACAGGTTCT GGTGCGGCGG ATTGTTGTCA CCTATCAATA TGACAGCAAC AATTCTGATA GCAATATCTA TGCAGGTCGT TTGCAATACA ACTTTTCCCG CACCCTCAAC CAAGAGAGTT GGATCGCTGC AACCTATGTC AGAGAGAATC AAGGACTACG TGGTTTTGAA CTTTATGGTG CAGATGCCAA AATCTCTCTC GGTTCTCAAA ACCAGCTAAT TGCCGAATAT GCTCATTCTC GTAATGATTC TGACATTATG GGGCGAGTAC GTGGCGAAGC CTACCGTCTA GAAGCCCAAG GACAGATTTT TTCAGGTTTA CAAGGTCGGG CTTATTATCG CTATGCTGAT ACAGGTTTTG CCAATAACGC CACTATTAGT TTTGTCCCTG GTCAAACTCG CTATGGTGGA CAGTTAACAG GGCGACTTTC CCAAACTACA AATATTCGTG TCCAGTATGA CCATGAAGAC AACTTTGGTA TTGCACCTCA ACCACTAGAT ACATTTGAAG AATTATTTTC TCCACGTTCA CAAGCAATTC CAGGTAGCCA AGTCGATAAT TCCCTGACAA CAATTTCGGC GGGGATTCAA CAACGTTTTG GTAAAGCCAC TGTAGATGTA GATTGGATTC ACCGTAATCG GGAAGACCGG ATAGCGACAA ATGGTCTAGA AAGTACATCA AATCAATTAC GTTCCCGTCT AACATATCCC CTGACAAACA ACCTGACATT CCAAGCCCAA AACGAACTCA CCCTATCTTC CCAAAAAGAT ACTGTCTACC CAGACCGCAC TATCTTCGGT CTCAATTGGG CTGTTGTTCC TGGTGTGAAT ATCAGTCTGG CTCAACAGTT TTACAGTAGC GGTCAGTCTT ACAGTAACTC CATCACCAGT TTAAGTGTTA ACGGTGAGCA TAAACTCGGT TCTGATACTA CCCTTACTGG TCGTTACTCA ATCATTGGTG GGGCTAATGA ACTGACTACT CAAGGTGCTA TTGGGTTAAA TAACCGTTGG CTGATTGCTT CTGGTTTGCG GTTGAATTTG GCTTATGAAC ACGTTTTTGG TAACTTCTTC AACCGTACCG CCGCAGGTCA ACAATTTGCC CAACCCTTTG CTGTTGGTCA AAGTGCTTCT TCTATTGGAT TTAATGGGGG TGATAGTTAC AGCATAGGTT TGGAATACTC TGATAATCCT CAATTCCAAG CCAGCGCGCG TTATGAACAT CGGACTTCTT CTGGTGGTTC TAACACAGTG ATTACAGCCG CCGCCTTAGG GAAAATTTCT CCTGCACTCA CAGCTTTGGT GAGATATCAA CAAGCCAACT CTTCCAATCA AAAACTCTCA GGACTAGGAG ATACAGCGAA TTTGAAGCTG GGTTTAGCTT ACCGCGACCC CAACAACGAT AAATTTAACG CCTTGTTGCG TTATGAGTAT CGCCAAAATC CGGCGACTAT TCCTGACACG ATTCTTTTAG GTAGTGGTAC AGGTTCTCAA GACCATACCT TCGCTGTAGA AGCGATTTAT GCGCCTAATT GGCAATGGGA ATTTTATGGT AAGTATGCAC TGCGTAACAG TACTTCTTAT TTAGCAAATG ATCTAGTAGG TACTAGTACG GTGAACTTGG GACAATTACG TGCTACTTAT CGCCTGGGAT ATAGTTGGGA TTTAGTTGGT GAGGCGCGGG TGATTGGTCA AGCCAACTAT ACTGAGACGG GTTTTGTAGT GGAGGCTGGG TATTATTTAA GTCCTAATCT GCGGCTTTCG GCTGGTTACG CCTTTGGTAA AGTTGATGAC CAAGATTTTT CCGGTACTCG TTCTGCGGGG GGATTATATT TGGGTTTGAC GCTAAAACTT AACGAATTAT TTGATGGCTT TGGCTTACAA AAACCTGTAA CAGCAGCTAA AAAATAA
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Protein sequence | MKPVTIFNLR LMGAMAGAFS FVLYPAIVHA EVPENPEFSP DLENPSPDLS IKREALNIPL FPLEKEIRGL GRTTELTTQL TQDEIENPSP APEALNISTS PVEKGVRGLG RTTQTNEVQE ETPTSNAPTN AISPFQPADD PLPRGLSRLA EPAPTTPKEI PTFQPATDTP IPRSLRKLVA ETDKGNGRRE NTPTTATGVK ILTPSPDGVI DVPATTVAVQ FPSGSQVELR VNGVLVDSSL LGRTETDADT NLVTQTWYGV GLKEGENTLA AQIVGGTEAP VTLRVVVRGT AKKLTVETVE SRVPADGRST ATIRGQLLDE NGNRSNQDAI ITLIPTVGEL VGTDLKPEQP GFQVEAKKGE FTAVWRSPLQ AQTGRIRAVA NDLEAFTQLE FATALRPSLV TGVIDVRLGA RGTNYYSRFR DFLPSDRNNG TQLEFNSAIF ATGAIGEWLF TGAYNSSRSL NEDCNCDNRL FRSYQFSEQN YPVYGDSSKV DVVTPSIDSV YLRFERSTGI PGTAPDYAMW GDYNTEEFAR SSQQFTAVTR QLHGFKANYN LGNLQITGFY GNNLEAFQRD TIAPDGTSGY YFLSRRLVVP GSENLFIELE ELNRPGTVLE RKQLSRGPDY EIDYDRGTVI FREPVLRTDI DATGQVLVRR IVVTYQYDSN NSDSNIYAGR LQYNFSRTLN QESWIAATYV RENQGLRGFE LYGADAKISL GSQNQLIAEY AHSRNDSDIM GRVRGEAYRL EAQGQIFSGL QGRAYYRYAD TGFANNATIS FVPGQTRYGG QLTGRLSQTT NIRVQYDHED NFGIAPQPLD TFEELFSPRS QAIPGSQVDN SLTTISAGIQ QRFGKATVDV DWIHRNREDR IATNGLESTS NQLRSRLTYP LTNNLTFQAQ NELTLSSQKD TVYPDRTIFG LNWAVVPGVN ISLAQQFYSS GQSYSNSITS LSVNGEHKLG SDTTLTGRYS IIGGANELTT QGAIGLNNRW LIASGLRLNL AYEHVFGNFF NRTAAGQQFA QPFAVGQSAS SIGFNGGDSY SIGLEYSDNP QFQASARYEH RTSSGGSNTV ITAAALGKIS PALTALVRYQ QANSSNQKLS GLGDTANLKL GLAYRDPNND KFNALLRYEY RQNPATIPDT ILLGSGTGSQ DHTFAVEAIY APNWQWEFYG KYALRNSTSY LANDLVGTST VNLGQLRATY RLGYSWDLVG EARVIGQANY TETGFVVEAG YYLSPNLRLS AGYAFGKVDD QDFSGTRSAG GLYLGLTLKL NELFDGFGLQ KPVTAAKK
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