| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4358 |
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| Symbol | |
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| ID | 3680602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5463585 |
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| End bp | 5465057 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637719711 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_324851 |
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| Protein GI | 75910555 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000366323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACG CATTAGCAGA CCGTTTAGAA TCCGCCTGGA AAAAGCTGCG CGGGCAAGAT
AAAATTTCTG AATCTAACAT TCAAGATGCT TTGCGGGAAG TGCGACGCGC CCTGTTGGAA
GCAGATGTTA ACCTCCAAGT AGTCAAAGAT TTTATTAGCG AAGTTGAAGC CAAGGCGCAG
GGAGCCGAAG TTATTAGCGG CGTGCGACCT GACCAGCAGT TCATCAAGAT TGTTTACGAT
GAACTGGTGC AGGTGATGGG GGAAGAAAAT GTTCCTCTGG CGGAAGTGGA ACAAAAGCCC
ACAATTGTTT TGATGGCTGG TTTACAAGGT ACTGGGAAAA CCACAGCCAC CGCCAAATTA
GCTTTACATT TACGGAAACT AGAACGCAGT TGCTTGTTAG TAGCCACAGA CGTATATCGT
CCAGCCGCTA TTGACCAGTT GCTGACACTA GGTAAACAAA TTGACGTACC AGTATTTGAA
TTGGGAAGTG ATGCAGACCC GGTAGAAATT GCCCGTCAAG GTGTGGAACG TGCCAAAGCA
GAGGGCGTGA ACACAGTCAT CATTGATACA GCAGGTCGTC TGCAAATTGA CGAAGACATG
ATGGCGGAAT TAGCCAGAAT AAAAGAAACC GTCCAGCCCC ACGAAACATT GTTGGTGGTG
GATTCCATGA CTGGTCAAGA AGCTGCCAAC CTCACCCGTA CTTTTCATGA GCAAATAGGT
ATTACTGGAG CAATTCTTAC CAAGATGGAT GGTGATAGCC GTGGTGGTGC GGCGTTGTCG
GTACGGCAAA TTTCGGGAGC GCCGATTAAG TTTGTGGGTG TGGGGGAAAA AGTCGAAGCC
CTACAACCAT TTTACCCAGA CCGTATGGCT TCCCGAATAT TGGGTATGGG TGACGTGCTG
ACTTTGGTAG AAAAAGCCCA GGAAGAGTTT GACTTAGCTG ATGCTGAGAA AATGCAGGAA
AAAATCCTGT CAGCGAAGTT TGACTTTACC GACTTTGTCA AGCAACTGCG GATGCTGAAA
AATATGGGAT CTCTGGGTGG TCTCCTGAAG ATGATTCCGG GGATGGGTAA ACTCTCAGAT
GATCAGCTAA AGCAGGGAGA AACCCAACTC AAGCGGTGTG AGGCGATGAT TAATTCCATG
ACCATCCAAG AACGCCGCGA CCCTGATTTA TTAGCGAGTT CCCCCAACCG ACGACGACGG
ATTGCGTCTG GTTCTGGTTA TAAAGAAGCA GATGTGAATA AACTAGTGGC TGATTTCCAA
AAAATGCGAT CGCTCATGCA GCAAATGGGT CAAGGTAATT TCCCAGGAAT GCCCGGAATG
TTTGGCGGTG GCGGTGGTGG AATGGGTAAT ATGTTCGGTG GTGGCGGTAA CCGTCCCGCA
GCCCCTGGCT GGCGCGGCTA CAATGGCGGC GGCGCTGGCA CGAAGAAGAA AAAACCCAAA
GACAAAAAGA AAAAAGGTTT TGGAAATCTG TAG
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| Protein sequence | MFDALADRLE SAWKKLRGQD KISESNIQDA LREVRRALLE ADVNLQVVKD FISEVEAKAQ
GAEVISGVRP DQQFIKIVYD ELVQVMGEEN VPLAEVEQKP TIVLMAGLQG TGKTTATAKL
ALHLRKLERS CLLVATDVYR PAAIDQLLTL GKQIDVPVFE LGSDADPVEI ARQGVERAKA
EGVNTVIIDT AGRLQIDEDM MAELARIKET VQPHETLLVV DSMTGQEAAN LTRTFHEQIG
ITGAILTKMD GDSRGGAALS VRQISGAPIK FVGVGEKVEA LQPFYPDRMA SRILGMGDVL
TLVEKAQEEF DLADAEKMQE KILSAKFDFT DFVKQLRMLK NMGSLGGLLK MIPGMGKLSD
DQLKQGETQL KRCEAMINSM TIQERRDPDL LASSPNRRRR IASGSGYKEA DVNKLVADFQ
KMRSLMQQMG QGNFPGMPGM FGGGGGGMGN MFGGGGNRPA APGWRGYNGG GAGTKKKKPK
DKKKKGFGNL
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