Gene Ava_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3690 
Symbol 
ID3679109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4599472 
End bp4599798 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content45% 
IMG OID637719041 
ProductXRE family transcriptional regulator 
Protein accessionYP_324191 
Protein GI75909895 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG AACCAGTTTT TGAAGAAAGC AGTGGTAACG TATTCGCTGA CCTCGGTTTG 
TCGAATGCTT CGGAACTTTT TACGCGGGGC AAAATAGGGA TTCAGGTACT CCGCCTCTTG
AAACAACGCA ATCTGAAACA GCGTGAAATC AGTGAAATTC TTAGTATTCC CCAGTCAGAA
GTATCTCATC TAATGAAAGG AGAATTTCAA CGGTTTAGCG AGGGCAAACT CCTAATTTTC
CTCAAGCGAC TCGATACGGA AATCACCTTA CATCTTCGCC CTCGTCATGC ACCAGACCAA
GCTGCTGAAA TCGTGATATC CCTATAG
 
Protein sequence
MTQEPVFEES SGNVFADLGL SNASELFTRG KIGIQVLRLL KQRNLKQREI SEILSIPQSE 
VSHLMKGEFQ RFSEGKLLIF LKRLDTEITL HLRPRHAPDQ AAEIVISL