Gene Ava_3528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3528 
Symbol 
ID3679552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4383647 
End bp4384816 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content43% 
IMG OID637718880 
Productpeptidoglycan binding domain-containing protein 
Protein accessionYP_324030 
Protein GI75909734 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAA ACTACCCCTC AATTGTCATA CTTACCTGTG TTTCTTGTGT GGGTTTTTAC 
TCAACTCAAG CCAGCACAGC TACAACCAAC TTCGCACCTA AAAAATTAGA AGTCGCACAA
GTCAGTTCCA CTTCAGCGAC TGGGCAAGTT GCTCTTAAGC CAGGTAGTCA AGGGCCGGAT
GTGCAAACAC TACAAATGCA ATTAAAGCAG CTAGGATACT ACAGTGGCAT TACTGATGGA
AAATACGGTG ACAGTACAAA ACAGGCTGTA GCAAAATTTC AGCAAGCTAA AGTGTTTAGT
AGAGTTGATG GGGTGGCGGA TCTAGCCACT AAAAGGGTTT TACAAACAGC CTTGATAGAT
AATCAGAATA AACTGGCTGT CGCCTCATCT TCTGAAGCTC CCGTCACAAC TACCAATAAC
TCTAATTCAG CCTTTAGAGA TTTTCTTTGG TGGTCAATAT TGGGCTTAGG AACTTTAGGA
ACTATTGGCG CAATCCTATA TTTATTACGG CGGTTCGACC CCAACAAACC ACAAAAGCAA
CTCAAAACAG CACCACAAAA AGCTTTAAGT GCCAATCAAC AAGATCCCAT TGCCCCAGTT
TTACAAGAGT TAGCACATAC ATCTAATTAT CAGGAAACTA CTGCTCAAGC CAGCGTTTCC
CAAACAGCGC CAGCATCATT CCCCGCAACA GTGATGCCTG TTGAAACAAC TTCCCGTCTT
GCTAAACTCA ACATTGTTGA TGAGTTAGTT CAAGATTTAC GCAGTACCGA CCCTAAAAAA
CGACACAAAG CTATTTGGGA TTTAGGACAG CAGGGCGATT CACGCGCAAT TCAACCACTC
GTTAATATGT TGATTGATGC CGATTCACAA CAACGTAATT TAATTTTGGC TGCTTTATCA
GAAATTAACG TCCGTTCACT CAAACCAATC AACAAGGCTT TTGCCGTCTC CATGCAGGAC
GAAAGCCCAC AAGTCAGACA AAACGCCATT CGTGATTTGA CCCGCGTCTA TGACATGATG
GCTCAGATGA GTCAGATGTT AGCTCATGCC CTAGATGATC CTGATGCTGA AGTCCAGGCA
ACAGCAAGGT ATGCCCTAAC TCAGATGAAT AGAATGCGGA ACGTAGATAA AACAAGCCTA
GCAGACAATA CTCCAGAAGA TTCTCGCTAA
 
Protein sequence
MRLNYPSIVI LTCVSCVGFY STQASTATTN FAPKKLEVAQ VSSTSATGQV ALKPGSQGPD 
VQTLQMQLKQ LGYYSGITDG KYGDSTKQAV AKFQQAKVFS RVDGVADLAT KRVLQTALID
NQNKLAVASS SEAPVTTTNN SNSAFRDFLW WSILGLGTLG TIGAILYLLR RFDPNKPQKQ
LKTAPQKALS ANQQDPIAPV LQELAHTSNY QETTAQASVS QTAPASFPAT VMPVETTSRL
AKLNIVDELV QDLRSTDPKK RHKAIWDLGQ QGDSRAIQPL VNMLIDADSQ QRNLILAALS
EINVRSLKPI NKAFAVSMQD ESPQVRQNAI RDLTRVYDMM AQMSQMLAHA LDDPDAEVQA
TARYALTQMN RMRNVDKTSL ADNTPEDSR