Gene Ava_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3377 
Symbol 
ID3680077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4200106 
End bp4200642 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID637718727 
Productcytochrome b6-f complex iron-sulfur subunit 
Protein accessionYP_323879 
Protein GI75909583 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.719786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATA CCTTAAATCA GCTCAATCCT TCCATGTCCA GGCGGCAACT CCTGAATTTC 
TTCACTGGGG CTATTGTGGC AGCTACGGCT AGTGCGGCCA TATATCCAGC GACTAAGTTT
TTTATGCCTC CAGCCGAAAG TACGGACGCA GAAGGTGGTG TTCTCGCTAA AGACAAAATC
GGTCATCCCA TCCCAGCCAG CCAAATTTTA GTCCAAGCAT CAGGAACACG GGCTTTAATT
GCTGGACTAG CTGGTGAGCC TACCTATTTA ACTGTTAGGG AAGATGGCAC TCTTGATCCG
ATGGGTATTG TTAATAACTG TACTCATTTG GGTTGTACCT TCCCTTGGAA TCCTGTTGAT
CAACAGTTTC AATGTCCTTG TCACGGTTCA CGCTATGATG CCCAAGGTTC CGTAGAACGT
GGACCTGCTA ACCGTCCTCT GAAGTTGGTT CACGTCCAGG TTAAAGATGA TTACATTTGG
ATTTCATCTT GGCAAGAAAC AGACCCCCGT ACTGGTGAAA AACCTTGGTG GGTTTAA
 
Protein sequence
MDDTLNQLNP SMSRRQLLNF FTGAIVAATA SAAIYPATKF FMPPAESTDA EGGVLAKDKI 
GHPIPASQIL VQASGTRALI AGLAGEPTYL TVREDGTLDP MGIVNNCTHL GCTFPWNPVD
QQFQCPCHGS RYDAQGSVER GPANRPLKLV HVQVKDDYIW ISSWQETDPR TGEKPWWV