Gene Ava_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_2995 
Symbol 
ID3681230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp3714309 
End bp3715049 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID637718341 
Producthypothetical protein 
Protein accessionYP_323500 
Protein GI75909204 
COG category[S] Function unknown 
COG ID[COG4328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.140186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.697444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA TTGGTATCGA TTTGGGTTGG AAGTCTCAAC CGAGTGGTTT ATGTTGCTTG 
CAATTAATTG AGGGTAAGTT AGAGATAGTT GACTTAGATC GTCAAGATGC GATCGCTCAT
ATTTTCACCT GGATAGATAC TTGGGTGCAA CCGGATGAAC CAGCCATCAT CGGCGTAGAT
GCACCCACCC TTATACCTAA CTCGACGGGA AGTCGTCTCC CTGACAAACT CACCCATAAG
TATTTCGGTA AATATCACGC TGGTTGTTAC CCCGCCAACC AAGGTCTAGC TTTTGCAGAA
CGGACTATAA ATTTTGGTTT AGAATTAGAA TCTCGTGGTT TTGCCCATGC ACCTACAATA
GAAGCACAAA AATTAGGCAG ATATCAAATA GAAGTTTTCC CCCATCCGGC AATAGTTCAC
CTATTCAGCT TAGATCGTAT TCTTAAATAT AAAAAAGGGC GCATCAGTGA GCGCCGCTTA
GAATTAATCA AACTTTATCA ATATATTGTG GATATCCTAC CCACAATGGA ACCTGCTTTG
TGTGTCAAAA AGTTATCCCT TGGTGAAATT CCCCACACTG GTGCAGAACT GAAAGCCGCC
GAAGACAAAC TCGATAGCTT AATTTGTGCT TACGTAGCTG CCCATTGGTG GTATTGGGGA
GAACAACGTA ACCTAGTATT AGGTGATCGC ACCACTGGTT ACATTGTCAT CCCTAAGTCA
GTGCTGAGTC ATGAGTTGTA A
 
Protein sequence
MKFIGIDLGW KSQPSGLCCL QLIEGKLEIV DLDRQDAIAH IFTWIDTWVQ PDEPAIIGVD 
APTLIPNSTG SRLPDKLTHK YFGKYHAGCY PANQGLAFAE RTINFGLELE SRGFAHAPTI
EAQKLGRYQI EVFPHPAIVH LFSLDRILKY KKGRISERRL ELIKLYQYIV DILPTMEPAL
CVKKLSLGEI PHTGAELKAA EDKLDSLICA YVAAHWWYWG EQRNLVLGDR TTGYIVIPKS
VLSHEL