| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2939 |
|---|
| Symbol | |
|---|
| ID | 3681368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3642802 |
|---|
| End bp | 3643563 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637718286 |
|---|
| Product | phycobilisome linker polypeptide |
|---|
| Protein accession | YP_323445 |
|---|
| Protein GI | 75909149 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC CATTACTCCA ATACAAACCA AGCTCTCAAA ATCACCGGGT TGCCAGCTTT
GGTGCGGCTG ACCAAAATGA AGATACACCA TACATCTATC GTATAGAAGA TGTCAGCTCA
TACACTGATA TTCAAAACAT CATTTGGGCT TCCTATCGCC AAGTCTTCAG CGAACATGAA
ATCCTCAAAT TCAACCGCCA AAAAACTCTG GAATCCCAGG TGAAGAACGG TTCTATTTCC
GTCAGAGATT TCATTCGTGG TTTAGCTAAG TCTGAAGCTT TTTACCGTTT AGTAGTCTCA
GTTAACAACA ACTACCGCCT AGTTGACATC ACTCTCAAGC GCCTGTTGGG TCGTTCTTCC
TACAATAAAG ACGAGCAAAT TGCTTGGTCT ATTGTTATCG GAACCAAAGG TTTTAGCGGT
TTTGTTGATG CACTCATCGA CAGTGAAGAG TACACCAAGA ACTTTGGCGA AAACATCGTA
CCTTACCAAC GCAAACGGAT GGAAGGTCGC CCCTACAACT TGGTAACACC ACGCTACGGC
GAAGACTTCC AAGAAAAAGC AGGCACAGTT CAAACCGACT GGCGCTTTAC CTTGGACAAA
TTCTACAGCC GCAAGTCCCA AGAAAAACAA CTACGGGAAG GCGACCCTCG GAAGTTTGCA
GATTTAGCAG CTTCAGTTGG TAACCAAGGT AACTACGCAC AAAGAATCTC TGCTTTTGAT
ATCGATTATC TAAATGCAGT GCCAAACCGT ACCAGACGCT AA
|
|---|
| Protein sequence | MALPLLQYKP SSQNHRVASF GAADQNEDTP YIYRIEDVSS YTDIQNIIWA SYRQVFSEHE
ILKFNRQKTL ESQVKNGSIS VRDFIRGLAK SEAFYRLVVS VNNNYRLVDI TLKRLLGRSS
YNKDEQIAWS IVIGTKGFSG FVDALIDSEE YTKNFGENIV PYQRKRMEGR PYNLVTPRYG
EDFQEKAGTV QTDWRFTLDK FYSRKSQEKQ LREGDPRKFA DLAASVGNQG NYAQRISAFD
IDYLNAVPNR TRR
|
|---|
| |