| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2115 |
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| Symbol | dapF |
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| ID | 7408824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerocellum thermophilum DSM 6725 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012034 |
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| Strand | - |
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| Start bp | 2244766 |
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| End bp | 2245602 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643716480 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002573963 |
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| Protein GI | 222530081 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTTTTT CTAAGATGCA CGGGCTTGGC AATGACTTTA TTGTGATAGA TGCAAGGGGT
AAAGAAGATA TAGATTATAA CTTGCTTGCA AAAAAGATGT GTCATCGCCA TATTGGTGTT
GGAGCAGATG GGATATTGCT TGTTTTAGAT TCGAAGCTTG CTGATATCAG GATGAGAATT
ATAAACTCAG ACGGGTCTGA AGCTGAGATG TGTGGAAATG GAATCAGGTG TTTTGCAAAG
TATGTATTTG AAAGGGGAAT TGTAAAATCT ACTAAATTCA AAGTTGAAAC ATTGGCAGGA
ATAATTGAAC CTGAGCTTTT TGTAAACGAA TATGGACTTG TTGATAAAGT TAAAGTGAAT
ATGGGAAAGC CCAGCTTTAA AAGAGAAGAT ATACCAATGC AAGGCGACCC AAAAAGTGAT
GCCATAAATA CATCTATTGT AGTTGATGGC AATGAATACA GAATTACATC TCTTTTGATG
GGTGTTCCTC ACACTATTTT GTTTGTTGAC GATTTAGAAA AGGTAGACAT TTATACTTTA
GGTCCTAAAA TAGAAAAGCA TGAGGTATTT CCAAGAAAAA CAAATGTCAA TTTTGTTCAG
GTGATTGACA AGAATAATAT AAAAGTGAGA ACTTGGGAAA GAGGTGCAGG GGCTACATTT
GCATGCGGTA CTGGTTCTTG TGCTTCTGTG ATAGCAGCAA ACTTAAATGG CTATGCGGAA
AGAAAAGCAA GTGTCCACCT TTATTTTGGA ATTCTTGAAA TAGAGTGGCA AGATGACGGT
ATAGTTTTTA TGACAGGACC TGCCGAGGAG GTTTTTGTTG GGGAATATTT GGATTAA
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| Protein sequence | MLFSKMHGLG NDFIVIDARG KEDIDYNLLA KKMCHRHIGV GADGILLVLD SKLADIRMRI
INSDGSEAEM CGNGIRCFAK YVFERGIVKS TKFKVETLAG IIEPELFVNE YGLVDKVKVN
MGKPSFKRED IPMQGDPKSD AINTSIVVDG NEYRITSLLM GVPHTILFVD DLEKVDIYTL
GPKIEKHEVF PRKTNVNFVQ VIDKNNIKVR TWERGAGATF ACGTGSCASV IAANLNGYAE
RKASVHLYFG ILEIEWQDDG IVFMTGPAEE VFVGEYLD
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