| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1198 |
|---|
| Symbol | hemC |
|---|
| ID | 7409672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | + |
|---|
| Start bp | 1290466 |
|---|
| End bp | 1291338 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643715563 |
|---|
| Product | porphobilinogen deaminase |
|---|
| Protein accession | YP_002573071 |
|---|
| Protein GI | 222529189 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0181] Porphobilinogen deaminase |
|---|
| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAC TTAGGATTGG TGCAAGGGAC AGCAAACTTA GCAGAATTCA AGTTGATATT
GTAGCAAGAA AAATCAAGCA AACCTTAGGT ATTGAATGTG AATTTGTTCC TATAAAGACA
AAAGGAGATA TTGATAAAAC AAAAAGCTTA AAAGATTTTC AAAGCCCCGG TGTATTTGTA
AAGGAGATTG AACTTGCACT TTTATCAAGG GAAATAGACT TAGCTGTCCA CAGCCTAAAG
GACCTGCCTT GTGAAATGGA TAGTAATTTT GATATTGTTG CAGTTGTCGA AAGAGAGGAC
CCCAGAGATG TGCTTGTGTC AAAAGATGGT GTGGGATTCT ACCAGCTAAA ACCAAACGCA
AAAATTGGAA CAAGTAGTTT AAGAAGAGAG GTACATTTAA AAAATTTAAG AGAAGATATA
CAGGTTGTTA ATATAAGAGG AAATATAGAA ACGCGACTTT CAAAGATTGA GTCAGAAGGG
CTTGATGGAG TTGTGCTTGC TTATGCTGCA TTAAAACGAC TAAATTTAGA TTCTCATGTG
AGTTATGTTT TCGATATAAA TGAAATTACA CCTTGCCCTG GTCAGGGGGC AATATGCATT
GAATGCCTTG AAGATAGTCC CTATAAAAGC ATCTTAAGCA AAATAAACGA TGTTAATGCA
TATATCCAAA CCCAATTTGA AAGGCTTGTT TTAAAGCTTT TGGGAGGAGG ATGTCATTCG
TCGATTGGCG TTTTTTGTAA AACAGACCAG GACAAAATTT ATGCATTTGC TTCCCTTTTA
AGAGGTGATA AATTAGTAAA AGCAAGTATT GAGGGTGACA AAGCTGACTT TTTGTCTCTT
GCAAATAAGC TAAGTAATAT GCTCAAAAGT TAG
|
|---|
| Protein sequence | MKKLRIGARD SKLSRIQVDI VARKIKQTLG IECEFVPIKT KGDIDKTKSL KDFQSPGVFV
KEIELALLSR EIDLAVHSLK DLPCEMDSNF DIVAVVERED PRDVLVSKDG VGFYQLKPNA
KIGTSSLRRE VHLKNLREDI QVVNIRGNIE TRLSKIESEG LDGVVLAYAA LKRLNLDSHV
SYVFDINEIT PCPGQGAICI ECLEDSPYKS ILSKINDVNA YIQTQFERLV LKLLGGGCHS
SIGVFCKTDQ DKIYAFASLL RGDKLVKASI EGDKADFLSL ANKLSNMLKS
|
|---|
| |